HHsearch results for GI: 254780187 and protein with PDBid: 3jyv_D
>3jyv_D 40S ribosomal protein S9(A); eukaryotic ribosome, RACK1 protein, flexible fitting; HET: 2MG H2U M2G OMC OMG YYG PSU 5MC 7MG 5MU 1MA; 8.90A {Thermomyces lanuginosus}
Probab=99.94 E-value=1.7e-28 Score=204.18 Aligned_cols=130 Identities=18% Similarity=0.240 Sum_probs=102.0
Q ss_pred EEEEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH--CCCC
Q ss_conf 12352005888888887700013689987765443341--3589999998848555156547999999987530--3344
Q gi|254780187|r 8 KHKIDRRIGENLWGRPKSPVNTRSYGPGLHGQRRKSKP--SYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADR--SRGD 83 (206)
Q Consensus 8 k~K~~RrlG~~l~~~~k~~~~~r~~~pGqhg~~r~~k~--S~yg~qL~eKQKlr~~YG~~~ekq~~~~~~~A~~--~~g~ 83 (206)
..++++++|. + +++.+.++++..++-++. +-++.+..++++++..|+ +.|++|+.++..+.+ ..+.
T Consensus 22 e~kl~~~yGL----~-----~k~e~~~~~~~~~~~r~~ar~l~~~~~~~~~r~~~~~~-ll~kl~~~g~~~~~~~~l~~v 91 (158)
T 3jyv_D 22 ELKLAGEFGL----K-----NKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNA-LIRRLVRVGVLSEDKKKLDYV 91 (158)
T ss_dssp --------------------------------------CHHHHHHHTTHHHHHHCCCC-CSHHHHHHTTSSSHHHHCCSC
T ss_pred HHHHHHHCCC----C-----CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCH
T ss_conf 8888652286----7-----46547422231678999999997357222089999999-999999875200112331100
Q ss_pred CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCC--EEEECCHH
Q ss_conf 30268999998888899862121247887887624978788889413534833884--78861100
Q gi|254780187|r 84 TSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGD--VIEVKQKS 147 (206)
Q Consensus 84 t~~~ll~~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd--~I~~~~ks 147 (206)
++.+++.+||+|||+||||+|||+|+.+|||||+||||+|||++||+|||+|+.|| .|++.++|
T Consensus 92 ~~~~~~~lLeRRLd~vv~r~g~a~s~~~ARqlI~HGHI~Vng~~V~iPSy~V~~~~Ed~I~~~~~S 157 (158)
T 3jyv_D 92 LALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTS 157 (158)
T ss_dssp HHHHHHHHHHHBHHHHHHHHTSSSSTTTTTHHHHTSCEEESSCCCSCTTCBCCSSSCEEECSTTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHEECCEEEECCEEECCCCEEEECCCCCEEEECCCC
T ss_conf 000689998776888999957779989998766788899999996379738425985669852899