HHSEARCH alignment of GI: 254780187 and SCOP domain: d1dm9a_

Alignment
>d1dm9a_ d.66.1.3 (A:) Heat shock protein 15 kD {Escherichia coli [TaxId: 562]}
Probab=99.28  E-value=1.1e-12  Score=100.00  Aligned_cols=56  Identities=25%  Similarity=0.327  Sum_probs=52.1

Q ss_pred             HHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHHH
Q ss_conf             988888998621212478878876249787888894135348338847886110022
Q gi|254780187|r   93 ESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQ  149 (206)
Q Consensus        93 E~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk~  149 (206)
                      ++|||..|++++|+.|+..|.|+|.||||.|||+++ .||+.|++||+|+++.....
T Consensus         4 ~mRlD~~L~~~r~~ktR~~A~~~i~~G~V~vNg~~v-Kps~~vk~GDvI~i~~~~~~   59 (104)
T d1dm9a_           4 EVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRS-KPSKIVELNATLTLRQGNDE   59 (104)
T ss_dssp             CCBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEEC-CTTCBCCTTCEEEEEETTEE
T ss_pred             CEEHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEC-CCCCCCCCCCEEEEEECCEE
T ss_conf             376899999822172099999999839715487414-55556899999999868948


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Heat shock protein 15 kD
domain: Heat shock protein 15 kD
species: Escherichia coli [TaxId: 562]