HHSEARCH alignment of GI: 254780187 and SCOP domain: d1h3fa2

Alignment

Probab=97.35  E-value=0.00018  Score=46.77  Aligned_cols=54  Identities=11%  Similarity=0.166  Sum_probs=47.2

Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHH
Q ss_conf             888899862121247887887624978788889413534833884788611002
Q gi|254780187|r   95 RLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSK  148 (206)
Q Consensus        95 RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk  148 (206)
                      .|..++..+|||+|..+||.+|..|-|.|||.+|+-|++.+.++|.+-++-..|
T Consensus        19 ~l~~ll~~~gl~~S~searRlI~~g~V~iN~~ki~d~~~~l~~~~~~il~~GKK   72 (81)
T d1h3fa2          19 WVARLFTLAGLTPSNAEARRLIQNRGLRLDGEVLTDPMLQVDLSRPRILQRGKD   72 (81)
T ss_dssp             EHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCEEECSSCEEEEETTT
T ss_pred             CHHHHHHHCCCCCCHHHHHHHHHCCCEEECCEEECCCCCEECCCCEEEEEECCC
T ss_conf             199999982977688999999986988989999338562553799699985584

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
domain: Tyrosyl-tRNA synthetase (TyrRS), C-terminal domain
species: Thermus thermophilus [TaxId: 274]