Probab=100.00 E-value=0 Score=524.75 Aligned_cols=201 Identities=39% Similarity=0.710 Sum_probs=189.8
Q ss_pred CCCCCCEEEEEEECCCCCCCC------CCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 764487123520058888888------87700013689987765443341358999999884855515654799999998
Q gi|254780187|r 2 SKRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQKMKKYYGDISEKKFRSIFK 75 (206)
Q Consensus 2 ~r~~gpk~K~~RrlG~~l~~~------~k~~~~~r~~~pGqhg~~r~~k~S~yg~qL~eKQKlr~~YG~~~ekq~~~~~~ 75 (206)
.||+||++|+|||+|++||++ +|+++++|++||||||+++++|+|+||+||+||||+||+|| |+|+||++||+
T Consensus 1 gRy~GPk~K~~RRlG~~l~~~g~~~~~~k~~~~kr~~~PG~hg~~r~~k~S~Yg~qL~EKQKlr~~YG-v~EkQfr~~~~ 79 (208)
T d2uubd1 1 GRYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQKLRRIYG-ISERQFRNLFE 79 (208)
T ss_dssp CCCCSCCHHHHHHHTSCCCSSSTTSSSTTSSSSSCCSCSSTTSSSCCCCCCHHHHHHHHHHHHHHHHT-CCHHHHHHHHH
T ss_pred CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CCHHHHHHHHH
T ss_conf 98667465641127898677785667877500048899987777678755578999999999999818-46188999999
Q ss_pred HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEECCEEEECCCEEECCCCEEEECCHHHHHHHHHH
Q ss_conf 75303344302689999988888998621212478878876249787888894135348338847886110022699998
Q gi|254780187|r 76 EADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLE 155 (206)
Q Consensus 76 ~A~~~~g~t~~~ll~~LE~RLD~~v~r~g~a~t~~~Arq~v~hg~i~vng~~v~~ps~~~k~gd~I~~~~ksk~~~~i~~ 155 (206)
+|.+++|+||++||++||+||||||||+|||+|+++|||||+||||+|||++||||||.|+|||+|+++++++++..+.+
T Consensus 80 ~A~~~~G~tg~~ll~lLE~Rld~vv~r~g~a~t~~~ARQ~v~Hg~i~vNg~~v~ips~~~~~gd~I~vreksk~~~~i~~ 159 (208)
T d2uubd1 80 EASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLVRHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQ 159 (208)
T ss_dssp HHHHSSSCHHHHHHHHHHTBHHHHHHHTTSSSSHHHHHHHHHTTCEEETTEECCCTTCBCCTTCEEEECGGGTTCHHHHH
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCEECCCEEEEECCEEECCCCEEEHHHCCCHHHHHHH
T ss_conf 99854798367899999999999998536201289888998735742288399862679428862001110001899999
Q ss_pred HHHH-CCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECC
Q ss_conf 7752-16899962788124318999967884211246753466316775049
Q gi|254780187|r 156 ASQL-AERDVPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206 (206)
Q Consensus 156 ~~~~-~~~~~P~wLevd~~~l~g~v~~~P~r~e~i~~p~~ine~LVVEyYSR 206 (206)
+++. ....+|+||++|.++|+|+|++.|++ +| +|+.+||+||||||||
T Consensus 160 ~le~~~~~~~P~wLevd~~~l~g~v~~~P~r-ee--i~~~ine~LIVEyYSR 208 (208)
T d2uubd1 160 NLEAMKGRKVGPWLSLDVEGMKGKFLRLPDR-ED--LALPVNEQLVIEFYSR 208 (208)
T ss_dssp HHHHHTTCCCCTTEEEETTTTEEEECSCCCG-GG--CCCSCCHHHHHHHHHC
T ss_pred HHHHHCCCCCCCCEEEECCCCEEEEEECCCH-HH--CCCCCCCCEEEEECCC
T ss_conf 9986222789898674051188999944577-87--7988772579986069
class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Ribosomal protein S4
domain: Ribosomal protein S4
species: Thermus thermophilus [TaxId: 274]