PSIBLAST alignment of GI: 254780187 and protein with PDB id: 1i94

>gi|14278533|pdb|1I94|D Chain D, Crystal Structures Of The Small Ribosomal Subunit With Tetracycline, Edeine And If3 Length = 208
>gi|14278554|pdb|1I95|D Chain D, Crystal Structure Of The 30s Ribosomal Subunit From Thermus Thermophilus In Complex With Edeine Length = 208
 Score =  214 bits (544), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 11/211 (5%)

Query: 3   KRESSKHKIDRRIGENLWGR------PKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
           +      ++ RR G  L+ +      PK  +  R Y PG HGQ+R  +PS + ++LR KQ
Sbjct: 2   RYIGPVCRLCRREGVKLYLKGERCYSPKCAMERRPYPPGQHGQKRARRPSDYAVRLREKQ 61

Query: 57  KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
           K+++ YG ISE++FR++F+EA + +G T    +  LESRLD +VYR  F  +   ARQ V
Sbjct: 62  KLRRIYG-ISERQFRNLFEEASKKKGVTGSVFLGLLESRLDNVVYRLGFAVSRRQARQLV 120

Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQ-LAERDVPEYISVNHDNM 175
            H H+ VNGR V++ SYR + GD I V +KS+ L  + +  + +  R V  ++S++ + M
Sbjct: 121 RHGHITVNGRRVDLPSYRVRPGDEIAVAEKSRNLELIRQNLEAMKGRKVGPWLSLDVEGM 180

Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
              F+R+P   +D+  PV     LV+EFYSR
Sbjct: 181 KGKFLRLPDR-EDLALPV--NEQLVIEFYSR 208