RPSBLAST alignment of GI: 254780187 and protein with PDBid: 3i1m
>3i1m_D 30S ribosomal protein S4; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_D* 3e1a_R 3e1c_R 1vs5_D 3i1o_D 3i1q_D 3i1s_D 3i1z_D 3i21_D 2qal_D* 1p6g_D 1p87_D 2aw7_D 2avy_D 2i2u_D 2i2p_D* 2qan_D* 2qb9_D* 2qbb_D* 2qbd_D ... Length = 206
Score = 190 bits (483), Expect = 3e-49
Identities = 81/211 (38%), Positives = 125/211 (59%), Gaps = 10/211 (4%)
Query: 1 MSKRESSKHKIDRRIGENLWG----RPKSPVNTRSYGPGLHGQRRKSKPSYFGLQLRAKQ 56
M++ K K+ RR G +L+ R PG HG R+ + S +G+QLR KQ
Sbjct: 1 MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGARKP-RLSDYGVQLREKQ 59
Query: 57 KMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRAKFVPTIFAARQFV 116
K+++ YG + E++FR+ +KEA R +G+T NL++ LE RLD +VYR F T ARQ V
Sbjct: 60 KVRRIYG-VLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLV 118
Query: 117 NHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAE-RDVPEYISVNHDNM 175
+H+ ++VNGR VNI SY+ DV+ +++K+K+ + V A +LAE R+ P ++ V+ M
Sbjct: 119 SHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKM 178
Query: 176 VATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
TF R P D+ + +L+VE YS+
Sbjct: 179 EGTFKRKPER-SDLSADI--NEHLIVELYSK 206