RPSBLAST alignment of GI: 254780187 and SCOP domain: d1c06a_

Alignment

 Score =  158 bits (401), Expect = 3e-40
 Identities = 69/163 (42%), Positives = 99/163 (60%), Gaps = 5/163 (3%)

Query: 44  KPSYFGLQLRAKQKMKKYYGDISEKKFRSIFKEADRSRGDTSHNLISFLESRLDTIVYRA 103
           K S +GLQL+ KQK++  YG ++E++FR  F+EA +  G    N +  LESRLD +VYR 
Sbjct: 2   KLSEYGLQLQEKQKLRHMYG-VNERQFRKTFEEAGKMPGKHGENFMILLESRLDNLVYRL 60

Query: 104 KFVPTIFAARQFVNHRHVLVNGRSVNIGSYRCKEGDVIEVKQKSKQLASVLEASQLAERD 163
               T   ARQ V H H+LV+G  VNI SYR K G  I V++KS+ L  + EA + A   
Sbjct: 61  GLARTRRQARQLVTHGHILVDGSRVNIPSYRVKPGQTIAVREKSRNLQVIKEALE-ANNY 119

Query: 164 VPEYISVNHDNMVATFVRIPSSLKDVPYPVIMQPNLVVEFYSR 206
           +P+Y+S + + M  T+ R+P    ++P  +     L+VEFYSR
Sbjct: 120 IPDYLSFDPEKMEGTYTRLP-ERSELPAEI--NEALIVEFYSR 159

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Alpha-L RNA-binding motif
superfamily: Alpha-L RNA-binding motif
family: Ribosomal protein S4
domain: Ribosomal protein S4
species: Bacillus stearothermophilus [TaxId: 1422]