BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= gi|254780188|ref|YP_003064601.1| hypothetical protein CLIBASIA_00355 [Candidatus Liberibacter asiaticus str. psy62] (36 letters) Database: las_proteome 1233 sequences; 328,796 total letters Searching...................................................done >gi|254780188|ref|YP_003064601.1| hypothetical protein CLIBASIA_00355 [Candidatus Liberibacter asiaticus str. psy62] Length = 36 Score = 73.9 bits (180), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 36/36 (100%), Positives = 36/36 (100%) Query: 1 MYLYLDWYKTIIVSKGKVESFFIKNAFINGKMIFED 36 MYLYLDWYKTIIVSKGKVESFFIKNAFINGKMIFED Sbjct: 1 MYLYLDWYKTIIVSKGKVESFFIKNAFINGKMIFED 36 Database: las_proteome Posted date: Jun 5, 2011 6:30 PM Number of letters in database: 328,796 Number of sequences in database: 1233 Lambda K H 0.329 0.145 0.446 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,392 Number of Sequences: 1233 Number of extensions: 481 Number of successful extensions: 1 Number of sequences better than 100.0: 1 Number of HSP's better than 100.0 without gapping: 1 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1 length of query: 36 length of database: 328,796 effective HSP length: 10 effective length of query: 26 effective length of database: 316,466 effective search space: 8228116 effective search space used: 8228116 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 31 (16.5 bits)