HHsearch alignment for GI: 254780190 and conserved domain: cd01597
>cd01597 pCLME pCLME: prokaryotic 3-carboxy-cis,cis-muconate cycloisomerase (CMLE)_like This group contains proteins similar to pCLME, a member of the Lyase class I family. Members of this family for the most part catalyze similar beta-elimination reactions in which a C-N or C-O bond is cleaved with the release of fumarate as one of the products. These proteins are active as tetramers. The four active sites of the homotetrameric enzyme are each formed by residues from three different subunits. CMLE catalyzes the cyclization of 3-carboxy-cis,cis-muconate (3CM) to 4-carboxy-muconolactone in the beta-ketoadipate pathway. This pathway is responsible for the catabolism of a variety of aromatic compounds into intermediates of the citric cycle in prokaryotic and eukaryotic micro-organisms.
Probab=100.00 E-value=0 Score=650.75 Aligned_cols=405 Identities=22% Similarity=0.269 Sum_probs=357.1
Q ss_pred CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCC
Q ss_conf 32177998876087788778999999999999999999998089998999999999999985874112650022024210
Q gi|254780190|r 21 YWGAQAQRSLENFKIGEEKQPLVIIRALGIIKQAAARVNIELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGT 100 (463)
Q Consensus 21 ~yG~qT~Ra~~nf~i~~~~~~~~~i~a~~~vK~AaA~an~~~G~l~~~~a~aI~~a~~ei~~g~~~d~Fpv~v~q~GsGT 100 (463)
T Consensus 5 ~y~~~e~~~i----~s----~~~~i~~~~~ve~A~A~a~~~lG~ip~~~a~~I~~a~~~---------~~~d~~~~~~~~ 67 (437)
T cd01597 5 LFGTPAMREI----FS----DENRVQAMLDVEAALARAQAELGVIPKEAAAEIAAAADV---------ERLDLEALAEAT 67 (437)
T ss_pred CCCCHHHHHH----CC----HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC---------CCCCHHHHHHHH
T ss_conf 3388999987----29----199999999999999999987699999999999987276---------467999999999
Q ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 01687305789999997323579864307446530125712344567899986633687899999999999999875078
Q gi|254780190|r 101 QSNMNVNEVISNRAIEILGGVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQD 180 (463)
Q Consensus 101 s~nMN~NEVIanra~e~~g~~~g~~~~vHPndhVN~~qStND~~~TA~~la~~~~~~~~L~~~l~~L~~aL~~ka~~~~~ 180 (463)
T Consensus 68 ~~~~~~v~a~v~~l~~~~~~~~g~~--vH------~G~TsnDv~~Ta~~l~l~~~~-~~l~~~l~~l~~~L~~~A~~~~~ 138 (437)
T cd01597 68 ARTGHPAIPLVKQLTAACGDAAGEY--VH------WGATTQDIIDTALVLQLRDAL-DLLERDLDALLDALARLAATHRD 138 (437)
T ss_pred HHCCCCHHHHHHHHHHHCCHHHCCC--CC------CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 8728828999999998568130275--57------997853138669999999889-99999999999999999998259
Q ss_pred CCCCHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHCCCCEE
Q ss_conf 64321440017600319999999999998228999997885300668870110454436355799999999860885076
Q gi|254780190|r 181 IIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVGFAEKVAQNIRDITGLPFIT 260 (463)
Q Consensus 181 ~~~~GRTHlQ~A~PiTlG~~~~~~~~~l~r~~~rL~~~~~~l~~~~lGGtAvGTGlna~~~f~~~~~~~La~~tgl~~~~ 260 (463)
T Consensus 139 ~~~~GrTH~Q~A~P~T~G~~~~~~~~~l~r~~~rl~~~~~~~~~~~lgG-AvGt~~-~~~~~~~~~~~~~a~~Lgl~~~~ 216 (437)
T cd01597 139 TPMVGRTHLQHALPITFGLKVAVWLSELLRHRERLDELRPRVLVVQFGG-AAGTLA-SLGDQGLAVQEALAAELGLGVPA 216 (437)
T ss_pred CEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCC-CCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 8201444674134341999999999999999999999999776435676-645454-57863799999999994899999
Q ss_pred CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEC--CCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 4207887612412899899999876438887999999827733472167506--88987564455456246788765200
Q gi|254780190|r 261 APNKFEALACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRSGLGELMLP--ENEPGSSIMPGKVNPTQCEAITQVCA 338 (463)
Q Consensus 261 a~n~~~a~~~rD~~~e~~~~L~~la~~L~Kia~Dirll~SGPr~g~gEi~lp--~~q~GSSiMP~K~NPv~~E~i~~~a~ 338 (463)
T Consensus 217 ----~~~~~~rd~~~e~~~~l~~la~~L~kia~Di~ll~---~~~~gei~~p~~~~~~GSS~MP~K~NPv~~E~v~~~a~ 289 (437)
T cd01597 217 ----IPWHTARDRIAELASFLALLTGTLGKIARDVYLLM---QTEIGEVAEPFAKGRGGSSTMPHKRNPVGCELIVALAR 289 (437)
T ss_pred ----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf ----86543538999999999999888999999999998---74330421543589988788899879788999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHCCCCEE------EEC
Q ss_conf 12101235553223457665300234432244589999999999999987349007899998874397366------201
Q gi|254780190|r 339 HIFGNHAAITFANSQGHFELNVYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLV------TAL 412 (463)
Q Consensus 339 qV~G~d~ti~~a~~~G~lELNv~~Plia~~ll~S~~lL~~a~~~f~~~~i~gl~vn~erm~~~l~~s~~lv------TaL 412 (463)
T Consensus 290 ~v~g~~~~~-~~~~~~~~Erd~~~~~~~~~~l~~~~~l~~~~l~~~~~~l~~l~vn~erm~~nl~~~~~~i~ae~~~~~L 368 (437)
T cd01597 290 RVPGLAALL-LDAMVQEHERDAGAWHAEWIALPEIFLLASGALEQAEFLLSGLEVNEDRMRANLDLTGGLILSEAVMMAL 368 (437)
T ss_pred HHHHHHHHH-HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHHHHCCCHHHHHHHHHHH
T ss_conf 998779999-9876754210546257789889999999999999999875115355999999998562689899999998
Q ss_pred CHHHHHHHH----HHHHHHHHHCCCCHHHHHHH----CCCCCHHHHHHHCCHHHHCC
Q ss_conf 105538999----99999999829998999998----58999889998518898438
Q gi|254780190|r 413 TSKIGYDNA----SMIAKKAHHNSTTLKEEAIA----SGLISATEYDLIVKPEKMIY 461 (463)
Q Consensus 413 ~p~iGy~~a----~~iak~A~~~g~~l~e~~~~----~g~ls~~eld~lldP~~mt~ 461 (463)
T Consensus 369 ~~~ig~~~Ahe~v~~~a~~A~~~g~~l~e~~~~d~~~~~~l~~~el~~lldP~~~iG 425 (437)
T cd01597 369 APKLGRQEAHDLVYEACMRAVEEGRPLREVLLEDPEVAAYLSDEELDALLDPANYLG 425 (437)
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHCCCCHHHHHHHCCHHHHCC
T ss_conf 633898999999999999999979889999864856437999999998729987739