PSIBLAST alignment of GI: 254780190 and protein with PDB id: 1vdk
>gi|48425891|pdb|1VDK|A Chain A, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466
>gi|48425892|pdb|1VDK|B Chain B, Crystal Structure Of Fumarase From Thermus Thermophilus Hb8 Length = 466
Score = 537 bits (1385), Expect = e-150, Method: Composition-based stats.
Identities = 248/464 (53%), Positives = 324/464 (69%), Gaps = 3/464 (0%)
Query: 2 TNTRNEQDSFGTMKVQEDRYWGAQAQRSLENFKIGEEK--QPLVIIRALGIIKQAAARVN 59
R E+D+ G ++V D+YWGAQ QRSLENF+IG ++ PL IIRA G++K+AAAR N
Sbjct: 1 MEYRIERDTMGEVRVPADKYWGAQTQRSLENFRIGTDRFRMPLEIIRAYGMLKKAAARAN 60
Query: 60 IELGKLDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEILG 119
+ELG+L +I +AI++A+EEV+ GK DDHFPLVV+QTGSGTQ+NMNVNEVI+NRA EILG
Sbjct: 61 LELGELPEEIAKAIIQAAEEVVQGKWDDHFPLVVFQTGSGTQTNMNVNEVIANRASEILG 120
Query: 120 GVMGSKSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQ 179
+GSK HPNDHVN QSSNDT+PTA+++A A + RL P + L T K F
Sbjct: 121 KPLGSK-YAHPNDHVNRGQSSNDTFPTAMYVAVALALHQRLYPAVEGLIRTFTAKAQAFD 179
Query: 180 DIIKIGRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTP 239
I+K+GRTH DA P+TLGQE +A Q+K ++ ++ GLY LA GGTAVGTGLN
Sbjct: 180 QIVKVGRTHLMDAVPITLGQEIGSWAAQLKTTLAAVKEMEKGLYNLAIGGTAVGTGLNAH 239
Query: 240 VGFAEKVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFLG 299
F E VA+ + + TGLPF A N+F ALA HD + GAI T A AL KI ND+R+L
Sbjct: 240 PRFGELVAKYLAEETGLPFRVAENRFAALAAHDELVNVMGAIRTLAGALMKIGNDVRWLA 299
Query: 300 SGPRSGLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFELN 359
SGP +G+GE+ +P NEPGSSIMPGKVNPTQ EA+T V ++GN + FA SQG+F+LN
Sbjct: 300 SGPYAGIGEITIPANEPGSSIMPGKVNPTQVEALTMVVVRVYGNDHTVAFAGSQGNFQLN 359
Query: 360 VYKPMIAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLVTALTSKIGYD 419
VYKP++AY+ L+SI LL+D++ SF + +GI+ E I+ L ++ ML TAL IGYD
Sbjct: 360 VYKPVMAYSTLESINLLADAVASFDAHLAQGIEPNLERIEEYLQKNPMLATALNKAIGYD 419
Query: 420 NASMIAKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMIYPH 463
A+ I KKA TLK+ A+ G ++ E+D IV P ++ PH
Sbjct: 420 KAAEIVKKALKEKKTLKQAALELGYLTEEEFDRIVVPMRLAKPH 463