RPSBLAST alignment for GI: 254780190 and conserved domain: TIGR00979

>gnl|CDD|130052 TIGR00979, fumC_II, fumarate hydratase, class II. Putative fumarases from several species (Mycobacterium tuberculosis, Streptomyces coelicolor, Pseudomonas aeruginosa) branch deeply, although within the same branch of a phylogenetic tree rooted by aspartate ammonia-lyase sequences, and score between the trusted and noise cutoffs. Length = 458

 Score =  747 bits (1930), Expect = 0.0
 Identities = 302/456 (66%), Positives = 357/456 (78%)

Query: 5   RNEQDSFGTMKVQEDRYWGAQAQRSLENFKIGEEKQPLVIIRALGIIKQAAARVNIELGK 64
           R E+DS G ++V  D+YWGAQ QRSLENFKIG EK PL +I A  I+K+AAA VN +LGK
Sbjct: 2   RIEKDSMGEIQVPADKYWGAQTQRSLENFKIGTEKMPLELIHAFAILKKAAAIVNEDLGK 61

Query: 65  LDPKIGEAIVKASEEVINGKLDDHFPLVVWQTGSGTQSNMNVNEVISNRAIEILGGVMGS 124
           LD K  +AIV+A++E++ GKLDDHFPLVVWQTGSGTQSNMNVNEVI+NRAIE+LGG +GS
Sbjct: 62  LDAKKADAIVQAADEILAGKLDDHFPLVVWQTGSGTQSNMNVNEVIANRAIELLGGKLGS 121

Query: 125 KSPVHPNDHVNLCQSSNDTYPTAIHIACAERIVHRLLPTLRNLHVALTKKISDFQDIIKI 184
           K PVHPNDHVN  QSSNDT+PTA+HIA    I ++L+P L NL   L  K  +F  I+KI
Sbjct: 122 KQPVHPNDHVNKSQSSNDTFPTAMHIAAVLAIKNQLIPALENLKKTLDAKSKEFAHIVKI 181

Query: 185 GRTHTQDATPLTLGQEFSGYATQVKNSIKRIEMTLDGLYELAQGGTAVGTGLNTPVGFAE 244
           GRTH QDATPLTLGQEFSGY  Q+++ ++RI  +L  LYELA GGTAVGTGLNT  GF E
Sbjct: 182 GRTHLQDATPLTLGQEFSGYVAQLEHGLERIAYSLPHLYELAIGGTAVGTGLNTHPGFDE 241

Query: 245 KVAQNIRDITGLPFITAPNKFEALACHDAIAFCHGAINTSATALFKIANDIRFLGSGPRS 304
           KVA+ I   TGLPF+TAPNKFEALA HDAI   HGA+ T A +L KIANDIR+LGSGPR 
Sbjct: 242 KVAEEIAKETGLPFVTAPNKFEALAAHDAIVEAHGALKTLAASLMKIANDIRWLGSGPRC 301

Query: 305 GLGELMLPENEPGSSIMPGKVNPTQCEAITQVCAHIFGNHAAITFANSQGHFELNVYKPM 364
           GLGEL +PENEPGSSIMPGKVNPTQCEA+T VC  + GN A I FA SQG+FELNV+KP+
Sbjct: 302 GLGELFIPENEPGSSIMPGKVNPTQCEALTMVCVQVMGNDATIGFAGSQGNFELNVFKPV 361

Query: 365 IAYNVLQSIQLLSDSIDSFTINCIEGIQARKENIQLSLNRSLMLVTALTSKIGYDNASMI 424
           I YN LQS++LLSD+++SF  +C+ GI+  KE IQ  LN SLMLVTAL   IGYDNA+ I
Sbjct: 362 IIYNFLQSVRLLSDAMESFRDHCVVGIEPNKERIQQLLNNSLMLVTALNPHIGYDNAAKI 421

Query: 425 AKKAHHNSTTLKEEAIASGLISATEYDLIVKPEKMI 460
           AKKAH    TLKE A+  GL+S  E+D  V PE+M+
Sbjct: 422 AKKAHKEGITLKEAALELGLLSEEEFDEWVVPEQMV 457