HHsearch alignment for GI: 254780191 and conserved domain: pfam01409
>pfam01409 tRNA-synt_2d tRNA synthetases class II core domain (F). Other tRNA synthetase sub-families are too dissimilar to be included. This family includes only phenylalanyl-tRNA synthetases. This is the core catalytic domain.
Probab=94.91 E-value=0.19 Score=30.20 Aligned_cols=180 Identities=15% Similarity=0.190 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHHHHCCCEECCCCCCC-----------CCCCC-----CHHEE-------------ECCCCCCCCCCCCCC
Q ss_conf 78999999999997898891166756-----------67787-----10023-------------014347554005887
Q gi|254780191|r 4 VSSIRTTFLEFFQKNGHELLPSSSLI-----------PCNDP-----TLMFT-------------NSGMVPFKNIFTGQE 54 (898)
Q Consensus 4 ~~eiR~~fl~fF~~~~H~~~~s~slv-----------p~~d~-----~llft-------------~Agm~~fk~~f~G~~ 54 (898)
T Consensus 19 i~~~~~~i~~~f~~~GF~~~~g~eves~~~NFDaLn~P~dHPaR~~~DTfy~~~~~~~~~~vLRtHTS~~q~r~l~-~~~ 97 (243)
T pfam01409 19 LTRVLEEIRDIFLSMGFEEVEGPEVESDFYNFDALNIPQDHPARDMQDTFYLKKPLKARRLLLRTHTTPVQARTLA-EKN 97 (243)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCHHHHHHHH-HCC
T ss_conf 9999999999998779868769835642777775578988987676760343366667686576879889999997-427
Q ss_pred CCCCCCCCCCCCCEECCCCCCCHHHCCCCCCCHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHHHCCCCHH-HEEEEECCC
Q ss_conf 9999985111543224898786343464885001788854223147-53788999899861334189812-379997188
Q gi|254780191|r 55 KPVYQAVTTVQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGNFSFGG-YFKERAIQLAWDLLTKEFDLDQR-RLYITVYDE 132 (898)
Q Consensus 55 ~p~~~r~~~~QkCiR~ggkhnDld~VG~t~rH~TfFEMlGn~Sfgd-YfK~eai~~awe~lt~~~~l~~~-~l~vtv~~~ 132 (898)
T Consensus 98 ~~p-~r~~~~grvyR-----~d~~----DatH~~~FhQ~Eg~vvd~~it~~~Lk~~l~~~~~~lfg~~~~~R~rp~yF-- 165 (243)
T pfam01409 98 KPP-IKIFSIGRVFR-----RDQV----DATHLPEFHQVEGLVVDENVSFADLKGVLEEFLRKFFGFEVKVRFRPSYF-- 165 (243)
T ss_pred CCC-EEEECCCEEEE-----CCCC----CCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCC--
T ss_conf 998-48981431332-----5889----84315310575578965777899999999999999739973798678869--
Q ss_pred HHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEH-HHHHHHCC
Q ss_conf 28999975663499989975357866654579999987704678853855689888777889826896001-12344304
Q gi|254780191|r 133 DEEAFKLWKKISGLSADKIIRITTNDNFWSMAETGPCGPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNL-VFMQFEQQ 211 (898)
Q Consensus 133 D~e~~~iW~~~~gi~~~~i~~~~~~dNfW~~g~~GpcGPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNl-VFmq~~~~ 211 (898)
T Consensus 166 ---------------------------PF-------TePS~Evdv~~------------~~~~~WlEi~G~Gmv~p~vl~ 199 (243)
T pfam01409 166 ---------------------------PF-------TEPSAEVDVYC------------CKGGGWIEIGGAGMVHPNVLE 199 (243)
T ss_pred ---------------------------CC-------CCCCCEEEEEE------------ECCCCEEEEEECCCCCHHHHH
T ss_conf ---------------------------99-------99861799999------------649972587503666788998
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf 788756576653101757999999988798530
Q gi|254780191|r 212 NKQERFILPKMSIDTGMGLERMATVLQEKTNNY 244 (898)
Q Consensus 212 ~~g~~~~Lp~~~IDTGmGLERl~~vlqg~~s~y 244 (898)
T Consensus 200 ~~g-id-~~~~g~AfG~GlERlaMl~~gi~DIR 230 (243)
T pfam01409 200 AVG-ID-EDYPGFAFGLGVERLAMLKYGIDDIR 230 (243)
T ss_pred HCC-CC-CCCEEEEEEECHHHHHHHHCCCCHHH
T ss_conf 669-89-89769998534889999982997789