HHsearch results for GI: 254780191 and protein with PDBid: 3kew_A
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens atcc 13124}
Probab=100.00 E-value=0 Score=392.33 Aligned_cols=221 Identities=23% Similarity=0.335 Sum_probs=192.8
Q ss_pred CCCEEEEEEEECCCEEEECCCCCEEEEEECCCCEEECCCCCCCCCCEEEECCEEEEEECCCCCCCEEEEEEECCCCCCCC
Q ss_conf 55348999974781320004797699997375200036876566514540424898522456553389985104678755
Q gi|254780191|r 487 GVSSIVKAIVQQGEIVEEAVSGQKVEVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQKKAEGIFVHHAIVERGILR 566 (898)
Q Consensus 487 ~~~s~v~~i~~~~~~v~~~~~g~~~~ivLd~T~FY~E~GGQ~~D~G~i~~~~~~~~V~dv~k~~~g~i~H~~~~~~g~l~ 566 (898)
.++++|+.+..+ ++.++||||+|||||||||||+|+|+|.+ +.|.+|++. +|.++|.+ ++.+.
T Consensus 15 ~~~a~V~~v~~~---------~~~~~vild~TiFyp~gGGQp~D~G~i~~----~~V~~v~~~-~g~i~H~~---~~~~~ 77 (241)
T 3kew_A 15 EFKGEIIEVKEI---------DGKFHVLLDQTAFFPGGGGQMGDLGLIDG----IKVLDVYEE-EGKVYHVL---EKEPK 77 (241)
T ss_dssp EEEECEEEEEEE---------TTEEEEEESEECCCCCBTTBCCCCEEETT----EEEEEEEEE-TTEEEEEE---SSCCC
T ss_pred EEEEEEEEEEEC---------CCEEEEEEECCCCEECCCCCCCCCEEEEE----EEEEEEEEE-CCEEEEEE---CCCCC
T ss_conf 789999999952---------99089999588514188997884214736----899999988-99999986---55778
Q ss_pred CCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 67338884212556777520136889999975212544444553002430000024767899999999999998988730
Q gi|254780191|r 567 TEMSLVLTIDYQNRRQLSINHSATHLLHHALSTILGSHVSQNGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQN 646 (898)
Q Consensus 567 ~g~~V~~~VD~~rR~~~~~~HTatHlL~~alr~vLG~hv~Q~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n 646 (898)
.|++|.++|||+||..+|++|||+|||++|+++++|.++ .|+.+.++++|+||+ ..+++++|.+||+.+|++|++|
T Consensus 78 ~g~~v~~~ID~~~R~~~~~~HTA~Hll~~al~~~~g~~~--~g~~~~~~~~~id~~--~~~~~e~l~~ie~~~n~iI~~~ 153 (241)
T 3kew_A 78 KLKNLQCELDWERRFDGMQQHLGQHLLSGCFYDLFGANT--CGFHLGKEISTVDIV--GFLDEKTIREAEKEANRLIFEN 153 (241)
T ss_dssp CCSSEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCE--EEEEECSSCEEEEEE--SCCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEECHHHHHHHHHHCHHHHHHHHHHHHHCCCCC--CCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHC
T ss_conf 652599999478823366546588998764443058511--145578533454555--6688778888899999999868
Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEE
Q ss_conf 45304661232221000355443155562489984476778553101562225886460110011012126882899997
Q gi|254780191|r 647 LPVVTRIMNREDAIASGAAALLGTKYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAI 726 (898)
Q Consensus 647 ~~V~~~~~~~~eA~~~ga~alfgekygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIeav 726 (898)
+||++.+++.+||++.+....+ .++++.||||+|++ +|.++||||||.||+|||.|+|++.++. +|.+||+|+
T Consensus 154 ~~v~~~~~~~~e~~~~~~~~~~-~~~~~~iRvV~Ig~-----~d~~pCgGTHV~~T~eIg~~~I~~~~~~-~~~~RI~~~ 226 (241)
T 3kew_A 154 LEVKSYAPSKKELKKVKTRRAL-PKTDEEIRIVEIVG-----LDLNACCGVHPRNTRDLQVIKIRRWEKH-KNATRIEYV 226 (241)
T ss_dssp CBEEEECCCTTTTTTCCCSSCC-CCCSSCCCEEEETT-----TEEEECCSCCCSBSGGGCCEEEEEEEEE-TTEEEEEEE
T ss_pred CCCCEEEEEHHHHHHHHHHCCC-CCCCCCEEEEEECC-----EEECCCCCCCCCCHHHCCCEEEEEEEEC-CCEEEEEEE
T ss_conf 9865898520123334442147-65689658999898-----5851899987787723067899999962-995999999
Q ss_pred ECHHHHHHH
Q ss_conf 168999999
Q gi|254780191|r 727 TGQRARSHL 735 (898)
Q Consensus 727 tG~~A~~~~ 735 (898)
||++|++.-
T Consensus 227 aG~~Ai~~~ 235 (241)
T 3kew_A 227 AGNRAVSEG 235 (241)
T ss_dssp EGGGGC---
T ss_pred ECHHHHHHC
T ss_conf 878998506