HHSEARCH alignment of GI: 254780191 and SCOP domain: d1jjca_

Alignment

Probab=90.91  E-value=0.027  Score=33.20  Aligned_cols=63  Identities=17%  Similarity=0.181  Sum_probs=36.4

Q ss_pred             CCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEH------HHHHHHCCCC-CCCCCCC--CCCCCCCCCHHHHHHHHCCC
Q ss_conf             7704678853855689888777889826896001------1234430478-8756576--65310175799999998879
Q gi|254780191|r  170 GPCSEIFFDQGECIPGGLPGSSEEGERYIEIWNL------VFMQFEQQNK-QERFILP--KMSIDTGMGLERMATVLQEK  240 (898)
Q Consensus       170 GPcsEi~~d~g~~~~~~~~~~~~~~~r~lEiwNl------VFmq~~~~~~-g~~~~Lp--~~~IDTGmGLERl~~vlqg~  240 (898)
                      =|+.||+.-+.            .+.++|||...      |+-.+..+.+ ..+-|.-  -...--||||||||+++-|.
T Consensus       178 ePS~Ev~v~~~------------~~~~WlEilG~Gmv~p~vL~~~gi~~~~~g~~~~~~~~~g~AfGlGlERlAMl~~gI  245 (266)
T d1jjca_         178 EPGAQFAVWWP------------EGGKWLELGGAGMVHPKVFQAVDAYRERLGLPPAYRGVTGFAFGLGVERLAMLRYGI  245 (266)
T ss_dssp             EEEEEEEEEEG------------GGTEEEEEEEEEEECHHHHHHHHHHHHTTTCCCCCTTCEEEEEEEEHHHHHHHHHTC
T ss_pred             CCCCCEEEEEE------------ECCCCCEEEEECCCCHHHHHHCCCCHHHCCCCCCCCCCEEEEEEECHHHHHHHHCCC
T ss_conf             68766688986------------057766687404568899986388656516885456776999863399999998299


Q ss_pred             CCCC
Q ss_conf             8530
Q gi|254780191|r  241 TNNY  244 (898)
Q Consensus       241 ~s~y  244 (898)
                      +..=
T Consensus       246 ~DIR  249 (266)
T d1jjca_         246 PDIR  249 (266)
T ss_dssp             SCGG
T ss_pred             CHHH
T ss_conf             8588

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Class II aaRS and biotin synthetases
superfamily: Class II aaRS and biotin synthetases
family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain
domain: Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS
species: Thermus thermophilus [TaxId: 274]