HHSEARCH alignment of GI: 254780191 and SCOP domain: d2e1ba2

Alignment
>d2e1ba2 d.67.1.2 (A:88-216) AlaX-M trans-editing enzyme, C-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=99.97  E-value=3.9e-32  Score=266.97  Aligned_cols=126  Identities=27%  Similarity=0.351  Sum_probs=116.6

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC-CCCEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             12556777520136889999975212544444-55300243000002476789999999999999898873045304661
Q gi|254780191|r  576 DYQNRRQLSINHSATHLLHHALSTILGSHVSQ-NGSCITPDGLRFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIM  654 (898)
Q Consensus       576 D~~rR~~~~~~HTatHlL~~alr~vLG~hv~Q-~GS~v~~~~lrfDfsh~~~lt~eel~~IE~~vN~~I~~n~~V~~~~~  654 (898)
                      ||+||+.+||+|||+|||++||++++|++++| .||+++++++||||+++..++++ +.+||+.+|++|.+|+||.+.+ 
T Consensus         1 Dw~rR~~~mr~HTa~Hll~~al~~~~g~~~~~~~G~~i~~~~~r~Df~~~~~l~~~-~~~ie~~~n~~I~~~~~v~~~~-   78 (129)
T d2e1ba2           1 DWDYRYKLMRIHTGLHLLEHVLNEVLGEGNWQLVGSGMSVEKGRYDIAYPENLNKY-KEQIISLFNKYVDEGGEVKIWW-   78 (129)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCEEEECCBCSSEEEEEEECSSCGGGG-HHHHHHHHHHHHHHCCBEEEEE-
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCHH-HHHHHHHHHHHHHHCCCHHHHH-
T ss_conf             97899999987079999999999854987654535664565479998355432168-9999999999998610334431-


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCEECCCCCCCCCHHHHHHHHEECCCCCCCCCEEEEEE
Q ss_conf             232221000355443155562489984476778553101562225886460110011012126882899997
Q gi|254780191|r  655 NREDAIASGAAALLGTKYNDRVRVVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAI  726 (898)
Q Consensus       655 ~~~eA~~~ga~alfgekygd~VRVV~I~~~d~~~~S~ElCGGTHV~nTgeIG~fkIise~si~sGvRRIeav  726 (898)
                                        .+.+|+|.|+     ++|+++||||||.||++||.|+|++.+++++|+|||++.
T Consensus        79 ------------------~~~~Riv~I~-----~~d~~~CgGTHV~~T~eIg~i~I~~~~~~gkg~~RI~~~  127 (129)
T d2e1ba2          79 ------------------EGDRRYTQIR-----DFEVIPCGGTHVKDIKEIGHIKKLKRSSIGRGKQRLEMW  127 (129)
T ss_dssp             ------------------SSSCEEEEET-----TSCEECCCSCCCSBGGGTCCEEEEEEEEEETTEEEEEEE
T ss_pred             ------------------CCCCEEEEEC-----CCCCCCCCCCCCCCHHHCCCEEEEEEEEEECCCEEEEEE
T ss_conf             ------------------3540578763-----515255488787365118519999999781881899999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: RRF/tRNA synthetase additional domain-like
superfamily: ThrRS/AlaRS common domain
family: AlaX-like
domain: AlaX-M trans-editing enzyme, C-terminal domain
species: Pyrococcus horikoshii [TaxId: 53953]