RPSBLAST alignment for GI: 254780191 and conserved domain: cd00673
>gnl|CDD|29811 cd00673, AlaRS_core, Alanyl-tRNA synthetase (AlaRS) class II core catalytic domain. AlaRS is a homodimer. It is responsible for the attachment of alanine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its predicted structure and the presence of three characteristic sequence motifs.. Length = 232
Score = 331 bits (849), Expect = 7e-91
Identities = 122/237 (51%), Positives = 153/237 (64%), Gaps = 5/237 (2%)
Query: 4 VSSIRTTFLEFFQKNGHELLPSSSLIPCNDPTLMFTNSGMVPFKNIFTGQEKPVYQAVTT 63
S IR TFL FF+K GH +PSS ++P +DPTL+FTN+GM FK IF G+ P +
Sbjct: 1 ASEIRETFLSFFEKKGHTRVPSSPVVPRDDPTLLFTNAGMNQFKPIFLGEVPPPANRLVN 60
Query: 64 VQKCVRAGGKHNDLDNVGRTNRHHTFFEMLGNFSFGGYFKERAIQLAWDLLTKEFDLDQR 123
QKC+RAG N G+T RHHTFFEMLGNFSFG YFKE AI AW+LLT+ L +
Sbjct: 61 SQKCIRAGDIDNV----GKTGRHHTFFEMLGNFSFGDYFKEEAIAFAWELLTEVLGLPKD 116
Query: 124 RLYITVYDEDEEAFKLWKKISGLSADKIIRITTNDNFWSMAETGPCGPCSEIFFDQGECI 183
RLY++V++ D+E +W GL +I RI DNFW M GPCGPCSEIF+D+GE
Sbjct: 117 RLYVSVFEGDDEEEAIWWWKIGLPGIRIERIGFKDNFWEMGGNGPCGPCSEIFYDRGEE- 175
Query: 184 PGGLPGSSEEGERYIEIWNLVFMQFEQQNKQERFILPKMSIDTGMGLERMATVLQEK 240
+E+ +RY+EIWNLVFMQ+ + LPK +DTGMGLER+ VLQ
Sbjct: 176 RDAASLPNEDDDRYLEIWNLVFMQYNRDADGTYRPLPKKIVDTGMGLERLVWVLQGV 232