RPSBLAST alignment of GI: 254780191 and protein with PDBid: 3kew
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens atcc 13124} Length = 241
Score = 115 bits (288), Expect = 4e-26
Identities = 50/234 (21%), Positives = 86/234 (36%), Gaps = 19/234 (8%)
Query: 498 QGEIVEEAVSGQKVEVVFDQTPFYAEAGGQLGDTGCAIGDGIRLQITDVQKKAEGIFVHH 557
+GEI+E K V+ DQT F+ GGQ+GD G G + DV ++ EG H
Sbjct: 17 KGEIIEVKEIDGKFHVLLDQTAFFPGGGGQMGDLGLIDGIK----VLDVYEE-EGKVYHV 71
Query: 558 AIVERGILRTEMSLVLTIDYQNRRQLSINHSATHLLHHALSTILGSHVSQNGSCITPDGL 617
E +L +D++ R H HLL + G++ + +
Sbjct: 72 LEKEPKK---LKNLQCELDWERRFDGMQQHLGQHLLSGCFYDLFGANTCG--FHLGKEIS 126
Query: 618 RFDVTHSKPITSAELKSIEDNVNDIIAQNLPVVTRIMNREDAIASGAAALLGTKYNDRVR 677
D + ++ E N +I +NL V + ++++ L +
Sbjct: 127 TVD--IVGFLDEKTIREAEKEANRLIFENLEVKSYAPSKKELKKVKTRRALPKTDEE--- 181
Query: 678 VVSVEYEDGGVHSSALCGGTHVSSTGEIMLLYIVSESSIRAGIRRIEAITGQRA 731
+ + C G H +T ++ ++ I RIE + G RA
Sbjct: 182 ---IRIVEIVGLDLNACCGVHPRNTRDLQVIKIRRWEKH-KNATRIEYVAGNRA 231