RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 75.0 bits (184), Expect = 5e-14
 Identities = 60/222 (27%), Positives = 106/222 (47%), Gaps = 20/222 (9%)

Query: 278  RTFPSPVLGSVSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLIL 337
            R  P  V G      V    P  S R  +  +N T    +  A +G +GAGKT+  S++ 
Sbjct: 920  RELPGLVPGVCVKNLVKIFEP--SGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILT 977

Query: 338  RFYDPCSGSVEIEGIDLRLLSLEEIRRFIAWVPQHPIMIA-ASVYDNIAIGCPHATRK-- 394
                P SG+V + G D+   +L+ +R+ +   PQH I+    +V ++I        R   
Sbjct: 978  GLLPPTSGTVLVGGKDIET-NLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWE 1036

Query: 395  --EIQNAAMLAQAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDE 452
              +++  AML          + G      + A  LS G  +++++A A + D+ +++LDE
Sbjct: 1037 EAQLEMEAMLE---------DTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDAKVVVLDE 1087

Query: 453  MGSALDIENEQKIWKVLREQRRGRTTIFASHRLSAIQDADMV 494
              S +D  + + IW +L + R GRT I ++H +    +AD++
Sbjct: 1088 PTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMD---EADLL 1126