RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR02204

>gnl|CDD|131259 TIGR02204, MsbA_rel, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins. Length = 576
 Score =  433 bits (1115), Expect = e-122
 Identities = 209/515 (40%), Positives = 300/515 (58%), Gaps = 21/515 (4%)

Query: 18  MFVLLLLAVASSLRYYCATMLGERMILFMQRDVIAKIIKLSPSFFNSRGHGEIFSILVKD 77
           + V L+LA+ ++ R+Y  T LGER++  ++R V A +I LSPSFF+    GE+ S L  D
Sbjct: 65  LVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTD 124

Query: 78  TERIKAIIGIGMSIVLRSLLMGFGAMCMMFVISIKLSLIVVSIVTLFLMVMIKF------ 131
           T  ++++IG  +S+ LR+ LM  G + MMF+ S KL+ +V+  V L L+ ++ F      
Sbjct: 125 TTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184

Query: 132 -SRKKTNTL-----YADEKKLLNIFSDMIKSVMVLQSFNAGKEAIRLYDIQSQKTYKGFL 185
            SR+  + +     YA E          + ++  +Q+F         +    +K Y+   
Sbjct: 185 LSRESQDRIADAGSYAGE---------TLGAIRTVQAFGHEDAERSRFGGAVEKAYEAAR 235

Query: 186 RSALIRTCIACFVIFFVSCGIFIVFLIGAHYVATAEMPRGKLAEFVVYAFIFFASIRSCL 245
           +    R  +   VI  V   I  V  +GAH V   +M  G L +FV YA +   SI +  
Sbjct: 236 QRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLS 295

Query: 246 GFIGGISQAIASLRRLRELIVCKLDISSPISSRTFPSPVLGSVSFRSVSFVYPGKSKRSI 305
              G + +A  +  RL EL+  + DI +P   +T P P+ G + F  V+F YP +  +  
Sbjct: 296 EVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPA 355

Query: 306 LKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEIRRF 365
           L  +N TV+PGET+ALVG SGAGK+++F L+LRFYDP SG + ++G+DLR L   E+R  
Sbjct: 356 LDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRAR 415

Query: 366 IAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENGYDTILGDGAV 425
           +A VPQ P++ AASV +NI  G P AT +E++ AA  A AHEFI  L  GYDT LG+  V
Sbjct: 416 MALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGV 475

Query: 426 HLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLREQRRGRTTIFASHRL 485
            LS GQ QRIAIARAILKD+PILLLDE  SALD E+EQ + + L    +GRTT+  +HRL
Sbjct: 476 TLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRL 535

Query: 486 SAIQDADMVFVLHDQVIVEKGVHEELLKKSGFYAH 520
           + +  AD + V+    IV +G H EL+ K G YA 
Sbjct: 536 ATVLKADRIVVMDQGRIVAQGTHAELIAKGGLYAR 570