RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR02204
>gnl|CDD|131259 TIGR02204, MsbA_rel, ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins. Length = 576
Score = 433 bits (1115), Expect = e-122
Identities = 209/515 (40%), Positives = 300/515 (58%), Gaps = 21/515 (4%)
Query: 18 MFVLLLLAVASSLRYYCATMLGERMILFMQRDVIAKIIKLSPSFFNSRGHGEIFSILVKD 77
+ V L+LA+ ++ R+Y T LGER++ ++R V A +I LSPSFF+ GE+ S L D
Sbjct: 65 LVVALVLALGTAARFYLVTWLGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTD 124
Query: 78 TERIKAIIGIGMSIVLRSLLMGFGAMCMMFVISIKLSLIVVSIVTLFLMVMIKF------ 131
T ++++IG +S+ LR+ LM G + MMF+ S KL+ +V+ V L L+ ++ F
Sbjct: 125 TTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVLLAVPLVLLPILLFGRRVRK 184
Query: 132 -SRKKTNTL-----YADEKKLLNIFSDMIKSVMVLQSFNAGKEAIRLYDIQSQKTYKGFL 185
SR+ + + YA E + ++ +Q+F + +K Y+
Sbjct: 185 LSRESQDRIADAGSYAGE---------TLGAIRTVQAFGHEDAERSRFGGAVEKAYEAAR 235
Query: 186 RSALIRTCIACFVIFFVSCGIFIVFLIGAHYVATAEMPRGKLAEFVVYAFIFFASIRSCL 245
+ R + VI V I V +GAH V +M G L +FV YA + SI +
Sbjct: 236 QRIRTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLS 295
Query: 246 GFIGGISQAIASLRRLRELIVCKLDISSPISSRTFPSPVLGSVSFRSVSFVYPGKSKRSI 305
G + +A + RL EL+ + DI +P +T P P+ G + F V+F YP + +
Sbjct: 296 EVWGELQRAAGAAERLIELLQAEPDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPA 355
Query: 306 LKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEIRRF 365
L +N TV+PGET+ALVG SGAGK+++F L+LRFYDP SG + ++G+DLR L E+R
Sbjct: 356 LDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDLRQLDPAELRAR 415
Query: 366 IAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENGYDTILGDGAV 425
+A VPQ P++ AASV +NI G P AT +E++ AA A AHEFI L GYDT LG+ V
Sbjct: 416 MALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGV 475
Query: 426 HLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLREQRRGRTTIFASHRL 485
LS GQ QRIAIARAILKD+PILLLDE SALD E+EQ + + L +GRTT+ +HRL
Sbjct: 476 TLSGGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRL 535
Query: 486 SAIQDADMVFVLHDQVIVEKGVHEELLKKSGFYAH 520
+ + AD + V+ IV +G H EL+ K G YA
Sbjct: 536 ATVLKADRIVVMDQGRIVAQGTHAELIAKGGLYAR 570