RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR03415
>gnl|CDD|132456 TIGR03415, ABC_choXWV_ATP, choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines. Length = 382
Score = 78.3 bits (193), Expect = 4e-15
Identities = 69/255 (27%), Positives = 115/255 (45%), Gaps = 32/255 (12%)
Query: 299 GKSKRSILK---------NVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEI 349
GK++ IL N + ++ GE L+G SG+GK+S+ + GSV +
Sbjct: 24 GKTREEILDETGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLV 83
Query: 350 EG----IDLRLLSLEEIRRF----IAWVPQH-PIMIAASVYDNIAIGCPHATRKEIQNAA 400
+ ID+ +RR ++ V Q +M +V +N+A G E +
Sbjct: 84 KDGDGSIDVANCDAATLRRLRTHRVSMVFQKFALMPWLTVEENVAFGLEMQGMPEAERRK 143
Query: 401 MLAQAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIE 460
+ + E +G L D G+ LS G QR+ +ARA D+ ILL+DE SALD
Sbjct: 144 RVDEQLELVG-LAQWADKKPGE----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPL 198
Query: 461 NEQKIW-KVLREQRRGRTTI-FASHRL-SAIQDADMVFVLHDQVIVEKGVHEELLKKSG- 516
++ ++L Q + TI F SH L A++ + + ++ I++ G EE++
Sbjct: 199 IRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPAN 258
Query: 517 -----FYAHYHILGM 526
F AH + L +
Sbjct: 259 DYVADFVAHTNPLNV 273