RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR01842

>gnl|CDD|162555 TIGR01842, type_I_sec_PrtD, type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 544

 Score =  181 bits (461), Expect = 4e-46
 Identities = 97/266 (36%), Positives = 148/266 (55%), Gaps = 8/266 (3%)

Query: 251 ISQAIASLRRLRELIVCKLDISSPISSRTFPSP-VLGSVSFRSVSFVYPGKSKRSILKNV 309
            S A  + +RL EL+      + P      P P   G +S  +V+ V PG  K+  L+ +
Sbjct: 284 FSGARQAYKRLNELL-----ANYPSRDPAMPLPEPEGHLSVENVTIVPPG-GKKPTLRGI 337

Query: 310 NFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEIRRFIAWV 369
           +F +Q GE +A++G SG+GK+++  LI+  + P SGSV ++G DL+    E   + I ++
Sbjct: 338 SFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYL 397

Query: 370 PQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLENGYDTILGDGAVHLST 429
           PQ   +   +V +NIA    +A  ++I  AA LA  HE I  L +GYDT++G G   LS 
Sbjct: 398 PQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSG 457

Query: 430 GQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLRE-QRRGRTTIFASHRLSAI 488
           GQ QRIA+ARA+  D  +++LDE  S LD E EQ +   ++  + RG T +  +HR S +
Sbjct: 458 GQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLL 517

Query: 489 QDADMVFVLHDQVIVEKGVHEELLKK 514
              D + VL D  I   G  +E+L K
Sbjct: 518 GCVDKILVLQDGRIARFGERDEVLAK 543