RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR01846

>gnl|CDD|162558 TIGR01846, type_I_sec_HlyB, type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. Length = 694

 Score =  214 bits (547), Expect = 4e-56
 Identities = 158/538 (29%), Positives = 249/538 (46%), Gaps = 64/538 (11%)

Query: 17  GMFVLLLLAVA-SSLRYYCATMLGERMILFMQRDVIAKIIKLSPSFFNSRGHGEIFSILV 75
            M  + +   A   LR Y    L  R+ + +   +   ++ L   +F SR  G+  +  V
Sbjct: 184 AMLAVAIFEPALGGLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVA-RV 242

Query: 76  KDTERIKAII-GIGMSIVLRSLLMGFGAMCMMFVISIKLSLIVV-SIVTLFLMVMI---- 129
           ++ E+I+  + G  +++VL  LL     + +MF  S  L+ +V+ S+V   L+ +     
Sbjct: 243 RELEQIRNFLTGSALTVVL-DLLFVVVFLAVMFFYSPTLTGVVIGSLVCYALLSVFVGPI 301

Query: 130 -------KFSRKKTNTLY--------------ADEKKLLNIFSDMIKSVMVLQSFNAGKE 168
                  KF R    T +              A E +  N +   +          A   
Sbjct: 302 LRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLA-----AYVAASFR 356

Query: 169 AIRLYDIQSQKTYKGFLRSALIRTCIACFVIFFVSCGIFIVFLIGAHYVATAEMPRGKLA 228
              L +I  Q          LI+      +++F           GAH V    +  G+L 
Sbjct: 357 VTNLGNIAGQAI-------ELIQKLTFAILLWF-----------GAHLVIGGALSPGQLV 398

Query: 229 EFVVYAFIFFASIRSCLGFIGGISQAIASLRRLRELIVCKLDISSPISSRT---FPSPVL 285
            F + A      +           Q   +L RL +++      +SP   R+      P L
Sbjct: 399 AFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDIL------NSPTEPRSAGLAALPEL 452

Query: 286 -GSVSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCS 344
            G+++F ++ F Y   S   +L N+N  ++PGE I +VG SG+GK+++  L+ R Y P  
Sbjct: 453 RGAITFENIRFRYAPDSP-EVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511

Query: 345 GSVEIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQ 404
           G V ++G+DL +     +RR +  V Q  ++ + S+ DNIA+  P A  + + +AA LA 
Sbjct: 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAG 571

Query: 405 AHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQK 464
           AH+FI  L  GY+T +G+   +LS GQ QRIAIARA++ +  IL+ DE  SALD E+E  
Sbjct: 572 AHDFISELPQGYNTEVGEKGANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEAL 631

Query: 465 IWKVLREQRRGRTTIFASHRLSAIQDADMVFVLHDQVIVEKGVHEELLKKSGFYAHYH 522
           I + +RE  RGRT I  +HRLS ++  D + VL    I E G HEELL   G YA   
Sbjct: 632 IMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQGLYARLW 689