RPSBLAST alignment for GI: 254780193 and conserved domain: TIGR03411
>gnl|CDD|163251 TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Length = 242
Score = 61.8 bits (151), Expect = 5e-10
Identities = 57/218 (26%), Positives = 96/218 (44%), Gaps = 31/218 (14%)
Query: 306 LKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLRLLSLEEI--- 362
L +++ V PGE ++G +GAGKT++ +I P GSV G DL L +I
Sbjct: 18 LNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARA 77
Query: 363 ---RRFIAWVPQHP-IMIAASVYDNIAIGCP----------HATRKEIQNAAMLAQAHEF 408
R+F Q P + +V++N+ + P E ++ + + E
Sbjct: 78 GIGRKF-----QKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDR--IEEVLET 130
Query: 409 IGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKV 468
IG + A LS GQ Q + I +++D +LLLDE + + E +K ++
Sbjct: 131 IGLADE-----ADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAEL 185
Query: 469 LREQRRGRTTIFASHRLSAIQD-ADMVFVLHD-QVIVE 504
L+ + + H + ++ AD V VLH V+ E
Sbjct: 186 LKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAE 223