RPSBLAST alignment for GI: 254780193 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 94.8 bits (236), Expect = 4e-20
Identities = 67/236 (28%), Positives = 105/236 (44%), Gaps = 24/236 (10%)
Query: 277 SRTFPSPVLGSVSFRSVS--FVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFS 334
S+++P+ GS S + + + LK+V+F V GE I L+G +GAGK+++
Sbjct: 7 SKSYPTYKGGSSSLKKLGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLR 66
Query: 335 LILRFYDPCSGSVEIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCP--HAT 392
L+ Y P SG+V + G LL L + +NI + +
Sbjct: 67 LLAGIYPPDSGTVTVRGRVSSLLGL-----------GGGFNPELTGRENIYLNGRLLGLS 115
Query: 393 RKEIQNAAMLAQAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDE 452
RKEI + + EF L + D + S+G R+A A A + ILL+DE
Sbjct: 116 RKEID--EKIDEIIEFSE-LGDFIDLPVK----TYSSGMKARLAFAIATALEPDILLIDE 168
Query: 453 MGSALDIENEQKIWKVLREQR-RGRTTIFASHRLSAIQD-ADMVFVLHDQVIVEKG 506
+ + D ++K + LRE +G+T I SH S+I+ D VL I G
Sbjct: 169 VLAVGDAAFQEKCQRRLRELLKQGKTVILVSHDPSSIKRLCDRALVLEKGKIRFDG 224