RPSBLAST alignment for GI: 254780193 and conserved domain: cd03224

>gnl|CDD|72983 cd03224, ABC_TM1139_LivF_branched, LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.. Length = 222
 Score =  105 bits (265), Expect = 2e-23
 Identities = 71/221 (32%), Positives = 111/221 (50%), Gaps = 12/221 (5%)

Query: 296 VYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSGSVEIEGIDLR 355
              GKS+  IL  V+ TV  GE +AL+G +GAGKT++   I+    P SGS+  +G D+ 
Sbjct: 8   AGYGKSQ--ILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDIT 65

Query: 356 LLSLEEI-RRFIAWVPQ-HPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQAHEFIGCLE 413
            L   E  R  I +VP+   I    +V +N+ +G     R+  +  A L + +E    L+
Sbjct: 66  GLPPHERARAGIGYVPEGRRIFPELTVEENLLLGA--YARRRAKRKARLERVYELFPRLK 123

Query: 414 NGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKIWKVLRE-Q 472
                     A  LS G+ Q +AIARA++    +LLLDE    L  +  ++I++ +RE +
Sbjct: 124 ----ERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELR 179

Query: 473 RRGRTTIFASHRLS-AIQDADMVFVLHDQVIVEKGVHEELL 512
             G T +        A++ AD  +VL    +V +G   ELL
Sbjct: 180 DEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220