RPSBLAST alignment for GI: 254780193 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 57.1 bits (138), Expect = 1e-08
Identities = 53/221 (23%), Positives = 99/221 (44%), Gaps = 37/221 (16%)
Query: 288 VSFRSVSF-VYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLI---LRFYDPC 343
+S+R++SF G+SK ILK+ + V+PGE + ++G G+G +++ +
Sbjct: 4 LSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV 63
Query: 344 SGSVEIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLA 403
G + GI + + E+ I +V + + P T +E + A+
Sbjct: 64 EGDIHYNGIPYKEFA-EKYPGEIIYVSEEDVHF------------PTLTVRETLDFALRC 110
Query: 404 QAHEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQ 463
+ +EF+ G +S G+ +R++IA A++ + +L D LD
Sbjct: 111 KGNEFV----RG-----------ISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTAL 155
Query: 464 KIWKVLREQRRG-RTTIFASHRLSAIQDADMVFVLHDQVIV 503
+I K +R +TT F S Q +D ++ L D+V+V
Sbjct: 156 EILKCIRTMADVLKTTTFV----SLYQASDEIYDLFDKVLV 192