RPSBLAST alignment for GI: 254780193 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 207 bits (529), Expect = 6e-54
Identities = 86/221 (38%), Positives = 131/221 (59%), Gaps = 1/221 (0%)
Query: 286 GSVSFRSVSFVYPGKSKRSILKNVNFTVQPGETIALVGDSGAGKTSIFSLILRFYDPCSG 345
G + FR+VSF YP + L NV+ T++ GE +A++G G+GK+++ L+ Y P SG
Sbjct: 1 GRIEFRNVSFSYPN-QEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSG 59
Query: 346 SVEIEGIDLRLLSLEEIRRFIAWVPQHPIMIAASVYDNIAIGCPHATRKEIQNAAMLAQA 405
SV ++G D+R L ++RR I +VPQ + ++ DNI +G P A + I AA LA
Sbjct: 60 SVLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGV 119
Query: 406 HEFIGCLENGYDTILGDGAVHLSTGQIQRIAIARAILKDSPILLLDEMGSALDIENEQKI 465
+F+ NG D +G+ LS GQ Q +A+ARA+L D PILLLDE SA+D+ +E+++
Sbjct: 120 TDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERL 179
Query: 466 WKVLREQRRGRTTIFASHRLSAIQDADMVFVLHDQVIVEKG 506
+ LR+ +T I +HR S + D + V+ IV G
Sbjct: 180 KERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220