HHsearch alignment for GI: 254780194 and conserved domain: COG0254
>COG0254 RpmE Ribosomal protein L31 [Translation, ribosomal structure and biogenesis].
Probab=99.95 E-value=7.1e-28 Score=186.41 Aligned_cols=70 Identities=40% Similarity=0.645 Sum_probs=65.3
Q ss_pred CCCCCCCCC-EEEEEEEC-CCCEEEEEEEECCCCCEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHCCCC
Q ss_conf 988788984-07999987-99979988765476886999854877897116817897213648999977602678
Q gi|254780194|r 1 MKKNIHPET-HLITVVMT-DGTQYQTRSTWKEEGAVMKLDIDPLSHFAWIGGRQKITDRGGQVSRFKKRFAGLSI 73 (74)
Q Consensus 1 MKk~IHP~y-~~v~v~~t-~g~~~~t~sT~g~~~~~~~vdi~s~~HP~fytgkq~~~dt~GrveKF~kkfg~~~~ 73 (74)
T Consensus 1 MKk~IHP~y~~~v~~~~~s~g~~f~~~ST~~~~--~i~vdV~s~~HP-FyTG~qk~~d~~GRv~kF~kRf~~~~~ 72 (75)
T COG0254 1 MKKDIHPEYYRPVVFVCSSCGNEFTTRSTKGTD--EINLDVCSKCHP-FYTGKQKIVDTEGRVEKFNKRFGGFKG 72 (75)
T ss_pred CCCCCCCCCCCEEEEEECCCCCEEEEEECCCCC--EEEEEECCCCCC-CCCCCEEEECCCCCHHHHHHHHCCCCC
T ss_conf 988769876324899967899789977516886--089986799877-693854576065539999877634344