HHsearch alignment for GI: 254780194 and conserved domain: PRK01678
>PRK01678 rpmE2 50S ribosomal protein L31 type B; Reviewed.
Probab=99.97 E-value=1.3e-30 Score=202.70 Aligned_cols=73 Identities=33% Similarity=0.549 Sum_probs=68.9
Q ss_pred CCCCCCCCCEEEEEE-ECCCCEEEEEEEE---------CCCCCEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHC
Q ss_conf 988788984079999-8799979988765---------476886999854877897116817897213648999977602
Q gi|254780194|r 1 MKKNIHPETHLITVV-MTDGTQYQTRSTW---------KEEGAVMKLDIDPLSHFAWIGGRQKITDRGGQVSRFKKRFAG 70 (74)
Q Consensus 1 MKk~IHP~y~~v~v~-~t~g~~~~t~sT~---------g~~~~~~~vdi~s~~HP~fytgkq~~~dt~GrveKF~kkfg~ 70 (74)
T Consensus 1 MKk~IHP~Y~~v~f~d~s~g~~f~~~ST~~~~~t~~~eG~~yP~~~vdi~S~~HP-FyTG~qk~vdt~GRVekF~kRy~~ 79 (86)
T PRK01678 1 MKKGIHPEYRPVVFHDTSTGFKFLTGSTITTDETIEWEGKTYPLVKVEVSSASHP-FYTGKQKFVDTEGRVEKFNKRFGR 79 (86)
T ss_pred CCCCCCCCCEEEEEEECCCCCEEEECCCCCCCCEEEECCEECCEEEEEECCCCCC-CEECCEEEEECCHHHHHHHHHHHH
T ss_conf 9898799980688898879999982754367840667786777698610688885-481876786143129999988731
Q ss_pred CCCC
Q ss_conf 6789
Q gi|254780194|r 71 LSIE 74 (74)
Q Consensus 71 ~~~k 74 (74)
T Consensus 80 ~~~~ 83 (86)
T PRK01678 80 FASK 83 (86)
T ss_pred HCCC
T ss_conf 0223