HHsearch alignment of GI: 254780194 and MMDB domain: 2j01_4_
>2j01_4 (4:) 50S ribosomal protein L31; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus}
Probab=99.93 E-value=7.5e-29 Score=191.82 Aligned_cols=69 Identities=26% Similarity=0.423 Sum_probs=64.9
Q ss_pred CCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCEEEEEECCCCCCCEECCCEEEEECCCHHHHHHHHHHCCCCC
Q ss_conf 98878898407999987999799887654768869998548778971168178972136489999776026789
Q gi|254780194|r 1 MKKNIHPETHLITVVMTDGTQYQTRSTWKEEGAVMKLDIDPLSHFAWIGGRQKITDRGGQVSRFKKRFAGLSIE 74 (74)
Q Consensus 1 MKk~IHP~y~~v~v~~t~g~~~~t~sT~g~~~~~~~vdi~s~~HP~fytgkq~~~dt~GrveKF~kkfg~~~~k 74 (74)
||+||||+|++++|.|+||++|+++||. |+|.|||||+||| ||||+|+++|++|||||||+||+.+..+
T Consensus 1 MKk~IHP~y~~v~~~ct~g~~f~~~ST~----~~i~vdv~s~~HP-fyTG~q~~~~~~GRv~kF~krf~~~~~~ 69 (71)
T 2j01_4 1 MKEGIHPKLVPARIICGCGNVIETYSTK----PEIYVEVCSKCHP-FYTGQQRFVDTEGRVERFQRRYGDSYRK 69 (71)
T ss_dssp CCGGGCCCCTTTTTCTTSCGGGSCSSSS----CCSSCCSCCCCCS-SSCCCSCC--------------------
T ss_pred CCCCCCCCCEEEEEEECCCCEEEECCCC----CEEEEEECCCCCC-CCCCCEEEEECCCCHHHHHHHHCCCCCC
T ss_conf 9887799878899998999889953026----1299987689877-4828788882467599999877253425