HHsearch alignment for GI: 254780195 and conserved domain: COG0693
>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only].
Probab=90.64 E-value=0.25 Score=30.13 Aligned_cols=45 Identities=22% Similarity=0.365 Sum_probs=38.9
Q ss_pred HCCCCEEEECCC-CCCCCC---HHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf 216983997377-786550---168889988740476322355769999
Q gi|254780195|r 344 FYGVHGILVPGG-FGKRGS---EGKIAAIKFARENKIPFLGICFGMQMA 388 (544)
Q Consensus 344 L~~~dGIlVPGG-FG~RGi---eGkI~Ai~yARen~iP~LGIClGmQ~a 388 (544)
T Consensus 64 ~~~ydal~ipGG~~~~~~~~~~~~~~~~v~~~~~~~k~vaaIC~g~~~L 112 (188)
T COG0693 64 AADYDALVIPGGDHGPEYLRPDPDLLAFVRDFYANGKPVAAICHGPAVL 112 (188)
T ss_pred CCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH
T ss_conf 1359899988997523221351789999999997699899984688998