HHsearch alignment for GI: 254780195 and conserved domain: COG0693

>COG0693 ThiJ Putative intracellular protease/amidase [General function prediction only].
Probab=90.64  E-value=0.25  Score=30.13  Aligned_cols=45  Identities=22%  Similarity=0.365  Sum_probs=38.9

Q ss_pred             HCCCCEEEECCC-CCCCCC---HHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             216983997377-786550---168889988740476322355769999
Q gi|254780195|r  344 FYGVHGILVPGG-FGKRGS---EGKIAAIKFARENKIPFLGICFGMQMA  388 (544)
Q Consensus       344 L~~~dGIlVPGG-FG~RGi---eGkI~Ai~yARen~iP~LGIClGmQ~a  388 (544)
T Consensus        64 ~~~ydal~ipGG~~~~~~~~~~~~~~~~v~~~~~~~k~vaaIC~g~~~L  112 (188)
T COG0693          64 AADYDALVIPGGDHGPEYLRPDPDLLAFVRDFYANGKPVAAICHGPAVL  112 (188)
T ss_pred             CCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHCCCEEEEECCHHHHH
T ss_conf             1359899988997523221351789999999997699899984688998