HHsearch alignment for GI: 254780195 and conserved domain: PRK13869

>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=93.74  E-value=0.63  Score=27.28  Aligned_cols=33  Identities=30%  Similarity=0.409  Sum_probs=21.1

Q ss_pred             CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf             444489999999999968982889854455334
Q gi|254780195|r   14 SLGKGVAAASLGALLQAHKYKVRVRKLDPYLNS   46 (544)
Q Consensus        14 glGKGi~aaSig~lLk~~g~~v~~~K~DPYlNv   46 (544)
T Consensus       132 GVGKTTtav~LA~~LA~~G~RVLlIDLDPQgnl  164 (405)
T PRK13869        132 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASL  164 (405)
T ss_pred             CCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf             765999999999999977998899964561788