HHsearch alignment for GI: 254780195 and conserved domain: PRK13869
>PRK13869 plasmid-partitioning protein RepA; Provisional.
Probab=93.74 E-value=0.63 Score=27.28 Aligned_cols=33 Identities=30% Similarity=0.409 Sum_probs=21.1
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC
Q ss_conf 444489999999999968982889854455334
Q gi|254780195|r 14 SLGKGVAAASLGALLQAHKYKVRVRKLDPYLNS 46 (544)
Q Consensus 14 glGKGi~aaSig~lLk~~g~~v~~~K~DPYlNv 46 (544)
T Consensus 132 GVGKTTtav~LA~~LA~~G~RVLlIDLDPQgnl 164 (405)
T PRK13869 132 GSGKTTTSAHLAQYLALQGYRVLAVDLDPQASL 164 (405)
T ss_pred CCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
T ss_conf 765999999999999977998899964561788