HHsearch alignment for GI: 254780195 and conserved domain: TIGR00337
>TIGR00337 PyrG CTP synthase; InterPro: IPR004468 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5 upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium .; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=100.00 E-value=0 Score=2131.87 Aligned_cols=534 Identities=55% Similarity=0.947 Sum_probs=521.3
Q ss_pred CCEEEEEECCEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCHHHHCC
Q ss_conf 92399993750144444899999999999689828898544553348888886443507872798400255641133228
Q gi|254780195|r 1 MVKYIFITGGVVSSLGKGVAAASLGALLQAHKYKVRVRKLDPYLNSDPGTMSPVQHGEVFVTDDGGEADLDFGHYERFMG 80 (544)
Q Consensus 1 m~KyI~VtGGV~SglGKGi~aaSig~lLk~~g~~v~~~K~DPYlNvD~GtmsP~eHGEVfVt~DG~EtDlDlG~YERFl~ 80 (544)
T Consensus 3 ~~KyifVTGGV~SslGKGI~AAS~grLL~~~gl~Vt~iKiDPYiN~DpGTMsP~qHGEVFVt~DG~EtDLDLGHYERFl~ 82 (571)
T TIGR00337 3 MMKYIFVTGGVVSSLGKGITAASLGRLLKARGLKVTIIKIDPYINIDPGTMSPLQHGEVFVTDDGAETDLDLGHYERFLD 82 (571)
T ss_pred CCEEEEEECCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCCHHHCC
T ss_conf 61179994438504026789999999998558806576307755668763778635427880688764366654212227
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHCCCC--------CCCEEEEECCCCCCCCCCCHH
Q ss_conf 747754680125899999988857775774025646024898999970788--------987899972431222123068
Q gi|254780195|r 81 ISTAKADNITAGRIYKNVIDRERRGDYLGTTVQVIPHVTNEIKEFITQGNE--------DADFVICEIGGTIGDIEVMPF 152 (544)
Q Consensus 81 ~~l~~~~niT~Gkiy~~vi~kER~G~ylG~TVQvIPHvTdeIk~~I~~~~~--------~~Dv~ivEiGGTVGDIEs~pF 152 (544)
T Consensus 83 ~~l~~~~NiTTGkIY~~Vi~kERkGdYLG~TVQiIPHiTnEIK~~I~~~A~~P~eDtG~~~Dv~IvEiGGTVGDIEs~PF 162 (571)
T TIGR00337 83 TNLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRIKRVAKKPVEDTGSGADVVIVEIGGTVGDIESLPF 162 (571)
T ss_pred CCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHH
T ss_conf 66774566100668998841037712148827984255467899999960377645679974799983770000036258
Q ss_pred HHHHHHHHHHCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHCCCC
Q ss_conf 99999999874977685799997467542256620034789999999974998768999238758999999998641988
Q gi|254780195|r 153 VEAIRQFGNEFSHRGSKALYIHLTLMPYIRSSGELKTKPTQHSVKELQALGVHPDILLIRADRDIPEMERRKISLFCNVP 232 (544)
Q Consensus 153 lEAiRQl~~e~g~~~~n~~fiHvtlvP~l~~~gE~KTKPTQhSVk~Lrs~GIqPDiivcRse~~l~~~~k~KIalfc~V~ 232 (544)
T Consensus 163 LEAiRQ~~~e~G~--Env~~iHvTLVP~i~aagE~KTKPTQhSVKeLRs~Gi~PD~i~cRs~~~l~~~~k~KiAlFCdV~ 240 (571)
T TIGR00337 163 LEAIRQLKKEVGR--ENVLFIHVTLVPYIAAAGELKTKPTQHSVKELRSLGIQPDIIICRSSEPLDKSLKKKIALFCDVE 240 (571)
T ss_pred HHHHHHHHHHHCC--CCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHCCCCC
T ss_conf 9999999987389--86799984002631448747877512789999860988868998188768977764521005889
Q ss_pred HHHEEECCCCCCHHHHHHHHHHCCHHHHHHHHHCCCCCC---------CCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCC
Q ss_conf 677240389862026689887649488999983878888---------62047899999874184343799995200148
Q gi|254780195|r 233 MSAVIPALDVDDIYKVPLSYHREGIDSVVLNAFGIENVS---------LPQIDNWQTFCDRTLSLKNEVKVAIVGKYIHL 303 (544)
Q Consensus 233 ~~~Vi~~~Dv~sIY~VPl~l~~q~l~~~I~~~L~l~~~~---------~~~l~~W~~~~~~~~~~~~~V~IaiVGKY~~l 303 (544)
T Consensus 241 ~~aVI~~~Da~sIY~vPl~L~~egl~~~~~~rl~L~~~~~~ee~k~rG~~~Ls~W~~~v~~~~~~~~~v~Ig~VGKY~eL 320 (571)
T TIGR00337 241 EEAVINAEDASSIYEVPLLLKKEGLDDYLCRRLNLNEKPLIEEEKERGEADLSEWEELVEKLINPKEEVTIGLVGKYVEL 320 (571)
T ss_pred CCCEEEEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCH
T ss_conf 73257865552401135210004335799998437877742012213755489999999863055251679897400251
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCH----HHHHCC------CCEEEECCCCCCCCCHHHHHHHHHHHC
Q ss_conf 1346888888888878736724167722565672344----566216------983997377786550168889988740
Q gi|254780195|r 304 KDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDP----VKHFYG------VHGILVPGGFGKRGSEGKIAAIKFARE 373 (544)
Q Consensus 304 ~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~----~~~L~~------~dGIlVPGGFG~RGieGkI~Ai~yARe 373 (544)
T Consensus 321 ~DaY~Sv~EAL~Hag~~~d~~v~i~Wi~s~d~e~~~~e~~k~~~l~~~~~~~~~DGILVPGGFG~RG~EGKI~Ai~yARE 400 (571)
T TIGR00337 321 KDAYLSVIEALKHAGAKLDTKVNIKWIDSEDLEEEEQEVDKAELLDGWNELSEVDGILVPGGFGERGVEGKIRAIKYARE 400 (571)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEEECHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHH
T ss_conf 35678899999876776374256898621013200120013555322445430680683688897660247899999876
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCC-CCCCC---CEECCCHHCC-CCCCCCCCCCCCCCCEEEECCEEEE
Q ss_conf 47632235576999999998751688999700035-66664---1211501123-4653001565546740231652578
Q gi|254780195|r 374 NKIPFLGICFGMQMAVIEAARNLAGIPNACSTEFS-EAGVP---VIALMSEWMK-GDQQEKRLPSDDLGATMRLGAYDVS 448 (544)
Q Consensus 374 n~iP~LGIClGmQ~avIEfARnvlgl~dAnStEf~-~~~~p---vI~~l~e~~~-~~~~~~~~~~~~~GGTMRLG~~~~~ 448 (544)
T Consensus 401 N~iPFLGICLGmQ~A~IEFARNV~Gl~~AnStEf~~~t~~p~~~Vv~LlpEq~d~~~~~~VRt~~~~lGGTMRLG~ypc~ 480 (571)
T TIGR00337 401 NNIPFLGICLGMQLAVIEFARNVLGLKGANSTEFDPETKYPKSPVVDLLPEQKDQNGNKEVRTEIEDLGGTMRLGLYPCI 480 (571)
T ss_pred CCCCEEEHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEECCCCCCCCCCCEECCEEECCCCCEEECCCCCEE
T ss_conf 36973302177788899997653479888741246455777331114253222446760013010138724305872217
Q ss_pred ECCC---CHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC
Q ss_conf 5587---0668863798476602523332788998999789599998699986899983899849997248773278769
Q gi|254780195|r 449 LKEE---TLISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLD 525 (544)
Q Consensus 449 l~~~---S~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~ 525 (544)
T Consensus 481 l~~~~eWt~a~klYg~~~v~ERHRHRYE~Nn~~~~~~E~~GL~vsG~S~dg~l~EiiE~~~HP~FvA~QFHPEF~Srp~~ 560 (571)
T TIGR00337 481 LKPGSEWTLAFKLYGKEEVYERHRHRYEVNNEYREELENKGLIVSGTSPDGRLVEIIELPDHPFFVACQFHPEFTSRPNR 560 (571)
T ss_pred ECCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCC
T ss_conf 71787232675533786788712444122757898998579589998699838999984797868886226751167788
Q ss_pred CCHHHHHHHHH
Q ss_conf 88415899999
Q gi|254780195|r 526 PHPLFVSFIQA 536 (544)
Q Consensus 526 phPLF~~fi~A 536 (544)
T Consensus 561 p~plF~Gfv~A 571 (571)
T TIGR00337 561 PHPLFLGFVKA 571 (571)
T ss_pred CCCCCHHHHCC
T ss_conf 88750553249