HHsearch alignment for GI: 254780195 and conserved domain: TIGR01855
>TIGR01855 IMP_synth_hisH imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; InterPro: IPR010139 Imidazole glycerol phosphate synthetase (IGPS) is a key metabolic enzyme, which links amino acid and nucleotide biosynthesis: it catalyses the closure of the imidazole ring within histidine biosynthesis (fifth step), and provides the substrate for de novo purine biosynthesis. IGPS consists of two different subunits: HisH, a glutamine amidotransferase (glutaminase), and HisF, a synthase (cyclase). HisH functions to provide a source of nitrogen, which is required for the synthesis of histidine and purines. In the HisH glutaminase reaction, the hydrolysis of glutamine yields ammonia, which is then used by HisF in the subsequent synthase reaction. The X-ray structure of the HisH/HisF heterodimer of IGPS reveals a putative tunnel for the transfer of ammonia from HisH to HisF via a (beta-alpha)8 barrel fold within HisF that abuts HisH . Ammonia tunnels connect the glutaminase and synthase active sites. HisH belongs to a large group of enzymes found in diverse and fundamental anabolic pathways. These enzymes share a common domain, referred to as the type-I glutamine amidotransferase (GATase) domain, which can occur either as single polypeptides (as with HisH) or as domains of large multifunctional proteins.; GO: 0016763 transferase activity transferring pentosyl groups, 0000105 histidine biosynthetic process, 0005737 cytoplasm.
Probab=99.45 E-value=9e-14 Score=119.92 Aligned_cols=182 Identities=25% Similarity=0.364 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHH-HHHCCCCEEEECCC--CCC--CCC-H-HHHHHHHHHHCCCCCHH
Q ss_conf 68888888888787367241677225656723445-66216983997377--786--550-1-68889988740476322
Q gi|254780195|r 307 YRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPV-KHFYGVHGILVPGG--FGK--RGS-E-GKIAAIKFARENKIPFL 379 (544)
Q Consensus 307 Y~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~-~~L~~~dGIlVPGG--FG~--RGi-e-GkI~Ai~yARen~iP~L 379 (544)
T Consensus 15 yrGV~~Al~~~G~~~~v~~-------------~-~y~~~~~aD~l~LPGVG~F~~aM~~l~~~~~~~~~~~~~~~~~P~l 80 (211)
T TIGR01855 15 YRGVKRALKRVGAEPVVVK-------------D-SYKELEKADKLILPGVGAFKAAMARLRELGLLDLLELVVKKKKPVL 80 (211)
T ss_pred HHHHHHHHHHCCCEEEEEC-------------C-CCHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 9999999984498179962-------------8-6034310686785785888999999885005878899996189689
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHC-CCCCCCCEECCCHHCCCCCCCC---CCCCCCCCCEEEECCEEEEECCCC--
Q ss_conf 3557699999999875168899970003-5666641211501123465300---156554674023165257855870--
Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEF-SEAGVPVIALMSEWMKGDQQEK---RLPSDDLGATMRLGAYDVSLKEET-- 453 (544)
Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf-~~~~~pvI~~l~e~~~~~~~~~---~~~~~~~GGTMRLG~~~~~l~~~S-- 453 (544)
T Consensus 81 GiCLGMQLL------------fe~SeE~g~~~--~GLG~i~G~V~k~~~~~~~~~lk~PHmGWN------~v~~~~~~C~ 140 (211)
T TIGR01855 81 GICLGMQLL------------FERSEEGGGEV--PGLGLIKGKVVKLEARVSLSKLKVPHMGWN------EVEPVKESCP 140 (211)
T ss_pred EEEHHHHHH------------HCCCCCCCCCC--CCCEECCCEEEEECCCCCCCCCCCCCCCCC------EEEEHHHCCC
T ss_conf 998023430------------01562437886--653112761342056778872545756564------2312311551
Q ss_pred HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCHHHHHH
Q ss_conf 66886379847660252333278899899978959999869998689998389984999724877327876988415899
Q gi|254780195|r 454 LISRIYGLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHALPEVVEYINHPWFIGVQYHPELKSRPLDPHPLFVSF 533 (544)
Q Consensus 454 ~~~~iYg~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~lvEiiEl~~HpffvgvQfHPEf~Srp~~phPLF~~f 533 (544)
T Consensus 141 ll~g~~~~~~~Y--FVHSY~~~~~-----~~S~~v~a~~~YG~~F~AaV~~~n---~~G~QFHPE-KS~~-~G~~lL~nf 208 (211)
T TIGR01855 141 LLKGIDKGAYFY--FVHSYYAVCE-----EESEAVLAKADYGEKFTAAVQKDN---IFGTQFHPE-KSGK-TGLKLLKNF 208 (211)
T ss_pred HHCCCCCCCCEE--EEEEEEEECC-----CCHHHEEEEHHCCCCEEEEEECCC---EEEEEECCH-HHHH-HHHHHHHHH
T ss_conf 130776678155--6886677616-----881150112001863044665487---899972856-8888-999999998
Q ss_pred H
Q ss_conf 9
Q gi|254780195|r 534 I 534 (544)
Q Consensus 534 i 534 (544)
T Consensus 209 ~ 209 (211)
T TIGR01855 209 L 209 (211)
T ss_pred H
T ss_conf 5