HHsearch alignment for GI: 254780195 and conserved domain: cd01653
>cd01653 GATase1 Type 1 glutamine amidotransferase (GATase1)-like domain. Type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to Class I glutamine amidotransferases, the intracellular PH1704 from Pyrococcus horikoshii, the C-terminal of the large catalase: Escherichia coli HP-II, Sinorhizobium meliloti Rm1021 ThuA. and, the A4 beta-galactosidase middle domain. The majority of proteins in this group have a reactive Cys found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. For Class I glutamine amidotransferases proteins which transfer ammonia from the amide side chain of glutamine to an acceptor substrate, this Cys forms a Cys-His-Glu catalytic triad in the active site. Glutamine amidotransferases activity can be found in a range of biosynthetic enzymes included in this cd: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase, anthranilate synthase component II, glutamine-depende
Probab=97.75 E-value=7e-05 Score=55.80 Aligned_cols=79 Identities=27% Similarity=0.455 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC----HHHHHHHHHHHCCCCCH
Q ss_conf 81346888888888878736724167722565672344566216983997377786550----16888998874047632
Q gi|254780195|r 303 LKDAYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS----EGKIAAIKFARENKIPF 378 (544)
Q Consensus 303 l~DaY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi----eGkI~Ai~yARen~iP~ 378 (544)
T Consensus 10 ~~~~~~~~~~~l~~~~------~~~~~i~~~~~~~~~-~~~~~~~d~liipgg~~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (115)
T cd01653 10 EELELASPLDALREAG------AEVDVVSPDGGPVES-DVDLDDYDGLILPGGPGTPDDLARDEALLALLREAAAAGKPI 82 (115)
T ss_pred CHHHHHHHHHHHHHCC------CEEEEEECCCCCCCC-CCCHHCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHCCCEE
T ss_conf 2899999999999779------979999658998666-576200899998998632999863999999999999869989
Q ss_pred HHHHHHHHHH
Q ss_conf 2355769999
Q gi|254780195|r 379 LGICFGMQMA 388 (544)
Q Consensus 379 LGIClGmQ~a 388 (544)
T Consensus 83 ~~~c~g~~~l 92 (115)
T cd01653 83 LGICLGAQLL 92 (115)
T ss_pred EEECHHHHHH
T ss_conf 9988588999