>cd03130 GATase1_CobB Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase. Type 1 glutamine amidotransferase (GATase1) domain found in Cobyrinic Acid a,c-Diamide Synthase. CobB plays a role in cobalamin biosythesis catalyzing the conversion of cobyrinic acid to cobyrinic acid a,c-diamide. CobB belongs to the triad family of amidotransferases. Two of the three residues of the catalytic triad that are involved in glutamine binding, hydrolysis and transfer of the resulting ammonia to the acceptor substrate in other triad aminodotransferases are conserved in CobB.

Probab=97.03 E-value=0.0017 Score=45.78 Aligned_cols=173 Identities=15% Similarity=0.135 Sum_probs=99.6 Q ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHCCCCEEEECCCCCCCCC------HHHHHHHHHHHCCCCCHH Q ss_conf 46888888888878736724167722565672344566216983997377786550------168889988740476322 Q gi|254780195|r 306 AYRSLIEALRHSGVSNYTKVQLSWIDAETLEKEDPVKHFYGVHGILVPGGFGKRGS------EGKIAAIKFARENKIPFL 379 (544) Q Consensus 306 aY~Si~EAL~hA~~~~~~kv~i~wIdse~le~~~~~~~L~~~dGIlVPGGFG~RGi------eGkI~Ai~yARen~iP~L 379 (544) T Consensus 12 yY~enl~~L~~~G------aelv~FSPl~--d----~~lP~~d~lylgGGyPE~~a~~Ls~N~~~~~~ir~~~~~G~Piy 79 (198) T cd03130 12 YYPENLELLEAAG------AELVPFSPLK--D----EELPDADGLYLGGGYPELFAEELSANQSMRESIRAFAESGGPIY 79 (198) T ss_pred ECHHHHHHHHHCC------CEEEEECCCC--C----CCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEE T ss_conf 5799999999889------9789877767--8----88998768982799875889999767999999999998499779 Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHH Q ss_conf 35576999999998751688999700035666641211501123465300156554674023165257855870668863 Q gi|254780195|r 380 GICFGMQMAVIEAARNLAGIPNACSTEFSEAGVPVIALMSEWMKGDQQEKRLPSDDLGATMRLGAYDVSLKEETLISRIY 459 (544) Q Consensus 380 GIClGmQ~avIEfARnvlgl~dAnStEf~~~~~pvI~~l~e~~~~~~~~~~~~~~~~GGTMRLG~~~~~l~~~S~~~~iY 459 (544) T Consensus 80 AECGGlMyL----~~~---i~~~-----~G~~~~M~Gllp~~~------------~m~~rl~lGY~~~~~~~~~~~~~~g 135 (198) T cd03130 80 AECGGLMYL----GES---LDDE-----EGQSYPMAGVLPGDA------------RMTKRLGLGYREAEALGDTLLGKKG 135 (198) T ss_pred EECHHHHHH----HHH---CCCC-----CCCEEEEEEEEEEEE------------EECCCCCCCEEEEEECCCCCCCCCC T ss_conf 982048887----422---0558-----998975021151688------------9777632563899982786223799 Q ss_pred CCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEECCCCC--EEEEEEECCCCEEEEEECCCCCCCCCC Q ss_conf 79847660252333278899899978959999869998--689998389984999724877327876 Q gi|254780195|r 460 GLDLIPERHRHRYEVNVRYREKLEGCGLKFSGFSVDHA--LPEVVEYINHPWFIGVQYHPELKSRPL 524 (544) Q Consensus 460 g~~~I~ERHRHRYEvN~~y~~~le~~Gl~~sg~~~d~~--lvEiiEl~~HpffvgvQfHPEf~Srp~ 524 (544) T Consensus 136 ~~lrGHEFHyS~~~~~~~~-------~~~~~~~~~~g~~~~~~G~~~~---n~~asY~H~h~~~~p~ 192 (198) T cd03130 136 TTLRGHEFHYSRLEPPPEP-------DFAATVRRGRGIDGGEDGYVYG---NVLASYLHLHWASNPD 192 (198) T ss_pred CEEEEEEEEEEEEECCCCC-------CCEEEEEECCCCCCCCCEEEEC---CEEEEEEEECCCCCHH T ss_conf 6888777551040318987-------5207998156998882789989---9999987867873957

HHsearch alignment for GI: 254780195 and conserved domain: cd03130