HHsearch alignment for GI: 254780197 and conserved domain: KOG1643

>KOG1643 consensus.
Probab=100.00  E-value=0  Score=581.71  Aligned_cols=245  Identities=38%  Similarity=0.622  Sum_probs=233.6

Q ss_pred             CCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCC
Q ss_conf             88850699864656899999999999952223457711999689655999999732576310222012223334332120
Q gi|254780197|r    3 VGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDIS   82 (264)
Q Consensus         3 ~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiS   82 (264)
T Consensus         1 MarkffvgGNwKmngs~~s~~eii~~ln~a~~-~~~vevvi~pP~~Yl~~ak~~l~-~~i~v~aQn~~~~k~GafTGEiS   78 (247)
T KOG1643           1 MARKFFVGGNWKMNGSKQSIKEIIKTLNAAKL-PANVEVVIAPPAPYLDYAKSKLK-PDIGVAAQNCYKVKSGAFTGEIS   78 (247)
T ss_pred             CCCCEEECCCCCCCCCHHHHHHHHHHHHHCCC-CCCCCEEEECCHHHHHHHHHHCC-CCCEEECCEEEECCCCCCCCCCC
T ss_conf             98655754641216758999999998665117-88876898088258999987477-53356212112036766347568


Q ss_pred             HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r   83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV  162 (264)
Q Consensus        83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~  162 (264)
T Consensus        79 ~~mlkd~G~~wVIlGHSERR~~fgEsd~~i~~K~~~Al~eGl~ViaCIGE~leeREaG~t~dVv~~Ql~aiad~v~~w~n  158 (247)
T KOG1643          79 AEMLKDLGAEWVILGHSERRHVFGESDEFIADKTAHALAEGLKVIACIGETLEEREAGKTLDVVFRQLKAIADKVKDWSN  158 (247)
T ss_pred             HHHHHHCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf             99998679978995446664350773478999999999758759999466277663486278999999999985478643


Q ss_pred             CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCH-HHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHH
Q ss_conf             113205135304557643112455446799999963322-4164308862778987899996689896889743435889
Q gi|254780197|r  163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPE-EGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHE  241 (264)
Q Consensus       163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~-~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~  241 (264)
T Consensus       159 iviAYEPVWAIGTGk~atp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g~N~~el~~~~diDGFLVGGaSLKpe  238 (247)
T KOG1643         159 IVIAYEPVWAIGTGKTATPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNGGNCKELAKKPDIDGFLVGGASLKPE  238 (247)
T ss_pred             EEEEEECEEEECCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCEEEEECCCCCCCCHHHHCCCCCCCCEEECCCCCCHH
T ss_conf             28985033665178779878999999999999863111666533378964655663478763654566347757546817


Q ss_pred             HHHHHHHHH
Q ss_conf             999999999
Q gi|254780197|r  242 LFLKIVEIV  250 (264)
Q Consensus       242 ~F~~Ii~~~  250 (264)
T Consensus       239 -F~~Iin~~  246 (247)
T KOG1643         239 -FVDIINAR  246 (247)
T ss_pred             -HHHHHHCC
T ss_conf             -98765325