HHsearch alignment for GI: 254780197 and conserved domain: cd00429
>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=92.94 E-value=0.85 Score=25.74 Aligned_cols=136 Identities=18% Similarity=0.301 Sum_probs=83.3
Q ss_pred HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf 67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r 83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV 162 (264)
Q Consensus 83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~ 162 (264)
T Consensus 73 i~~~~~~g~d~I~~-H~E~-------~~~~~~~i~~ik~~g~~~Glal~p~-------T~~~~----l~~~l~~~--D~v 131 (211)
T cd00429 73 IEAFAKAGADIITF-HAEA-------TDHLHRTIQLIKELGMKAGVALNPG-------TPVEV----LEPYLDEV--DLV 131 (211)
T ss_pred HHHHHHHCCCEEEE-CCCC-------CCCHHHHHHHHHHCCCCCEEEECCC-------CCHHH----HHHHHHHH--CEE
T ss_conf 99999709988998-6432-------2089999999997398723575489-------99899----99999751--522
Q ss_pred CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf 11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r 163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL 242 (264)
Q Consensus 163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~ 242 (264)
T Consensus 132 liMtV~PGf---~GQ~----f~~~~~~ki~~-l~~~~~~~~~~~~I~vDGGI~~~~i~~l~-~~Gad~~V~GS~iF~~~d 202 (211)
T cd00429 132 LVMSVNPGF---GGQK----FIPEVLEKIRK-LRELIPENNLNLLIEVDGGINLETIPLLA-EAGADVLVAGSALFGSDD 202 (211)
T ss_pred EEEEECCCC---CCCC----CCHHHHHHHHH-HHHHHHHCCCCEEEEEECCCCHHHHHHHH-HCCCCEEEECHHHHCCCC
T ss_conf 798746887---8875----45679999999-99999864998599996785989999999-859999997937758999
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254780197|r 243 FLKIVE 248 (264)
Q Consensus 243 F~~Ii~ 248 (264)
T Consensus 203 ~~~~i~ 208 (211)
T cd00429 203 YAEAIK 208 (211)
T ss_pred HHHHHH
T ss_conf 999999