HHsearch alignment for GI: 254780197 and conserved domain: cd00429

>cd00429 RPE Ribulose-5-phosphate 3-epimerase (RPE). This enzyme catalyses the interconversion of D-ribulose 5-phosphate (Ru5P) into D-xylulose 5-phosphate, as part of the Calvin cycle (reductive pentose phosphate pathway) in chloroplasts and in the oxidative pentose phosphate pathway. In the Calvin cycle Ru5P is phosphorylated by phosphoribulose kinase to ribulose-1,5-bisphosphate, which in turn is used by RubisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) to incorporate CO2 as the central step in carbohydrate synthesis.
Probab=92.94  E-value=0.85  Score=25.74  Aligned_cols=136  Identities=18%  Similarity=0.301  Sum_probs=83.3

Q ss_pred             HHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             67775407310010420002213579999999999998334747998165520333498000111002221000000134
Q gi|254780197|r   83 ANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSSV  162 (264)
Q Consensus        83 a~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~~  162 (264)
T Consensus        73 i~~~~~~g~d~I~~-H~E~-------~~~~~~~i~~ik~~g~~~Glal~p~-------T~~~~----l~~~l~~~--D~v  131 (211)
T cd00429          73 IEAFAKAGADIITF-HAEA-------TDHLHRTIQLIKELGMKAGVALNPG-------TPVEV----LEPYLDEV--DLV  131 (211)
T ss_pred             HHHHHHHCCCEEEE-CCCC-------CCCHHHHHHHHHHCCCCCEEEECCC-------CCHHH----HHHHHHHH--CEE
T ss_conf             99999709988998-6432-------2089999999997398723575489-------99899----99999751--522


Q ss_pred             CEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHH
Q ss_conf             11320513530455764311245544679999996332241643088627789878999966898968897434358899
Q gi|254780197|r  163 PVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHEL  242 (264)
Q Consensus       163 ~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~  242 (264)
T Consensus       132 liMtV~PGf---~GQ~----f~~~~~~ki~~-l~~~~~~~~~~~~I~vDGGI~~~~i~~l~-~~Gad~~V~GS~iF~~~d  202 (211)
T cd00429         132 LVMSVNPGF---GGQK----FIPEVLEKIRK-LRELIPENNLNLLIEVDGGINLETIPLLA-EAGADVLVAGSALFGSDD  202 (211)
T ss_pred             EEEEECCCC---CCCC----CCHHHHHHHHH-HHHHHHHCCCCEEEEEECCCCHHHHHHHH-HCCCCEEEECHHHHCCCC
T ss_conf             798746887---8875----45679999999-99999864998599996785989999999-859999997937758999


Q ss_pred             HHHHHH
Q ss_conf             999999
Q gi|254780197|r  243 FLKIVE  248 (264)
Q Consensus       243 F~~Ii~  248 (264)
T Consensus       203 ~~~~i~  208 (211)
T cd00429         203 YAEAIK  208 (211)
T ss_pred             HHHHHH
T ss_conf             999999