HHsearch alignment for GI: 254780197 and conserved domain: pfam00121
>pfam00121 TIM Triosephosphate isomerase.
Probab=100.00 E-value=0 Score=627.02 Aligned_cols=241 Identities=41% Similarity=0.687 Sum_probs=228.1
Q ss_pred EEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 06998646568999999999999522234577119996896559999997325763102220122233343321206777
Q gi|254780197|r 7 PLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISANML 86 (264)
Q Consensus 7 ~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~mL 86 (264)
T Consensus 1 piiiaNWKMn~~~~~~~~~~~~~~~~~~~~~~~~v~i~Pp~~~L~~~~~~~~~~~i~igaQn~~~~~~Ga~TGeiSa~mL 80 (243)
T pfam00121 1 PIIIGNWKMNKTLAEALELAKALLAAALKNDGVEVVVAPPFTYLSPVSQALKGSNIKVGAQNVSAEDSGAFTGEVSAEML 80 (243)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 97999416589999999999999863467789569997999999999998458996798323545678887476539999
Q ss_pred HHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCC--CCCCE
Q ss_conf 5407310010420002213579999999999998334747998165520333498000111002221000000--13411
Q gi|254780197|r 87 ADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFK--SSVPV 164 (264)
Q Consensus 87 ~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~--~~~~i 164 (264)
T Consensus 81 ~d~g~~yviiGHSERR~~f~Etd~~I~~K~~~al~~~l~pIlCiGEt~~~r~~~~~~~~l~~Ql~~~l~~i~~~~~~~ii 160 (243)
T pfam00121 81 KDLGVSYVIIGHSERRQYFGETDEIVAKKVKAALKLGLTPVLCVGETLEEREAGKTLEVLKRQLKAILAGLDEEALKNLI 160 (243)
T ss_pred HHCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCEE
T ss_conf 97599989984489898829988999999999998799399994671664435678999999999999678987715639
Q ss_pred EEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
Q ss_conf 32051353045576431124554467999999633224164308862778987899996689896889743435889999
Q gi|254780197|r 165 IAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFL 244 (264)
Q Consensus 165 IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~ 244 (264)
T Consensus 161 IAYEPvWAIGtG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~i~iLYGGSVn~~N~~~i~~~~~vdG~LVGgASL~~~~F~ 240 (243)
T pfam00121 161 IAYEPVWAIGTGKVATPEQAQEVHAFIRKYLAELSKEVAEEVRILYGGSVNPDNAKELLAQPDIDGFLVGGASLKAESFL 240 (243)
T ss_pred EEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHCCCCCEEEECCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
T ss_conf 99678222489999999999999999999999845423166428971768998999996688998798416867978888
Q ss_pred HHH
Q ss_conf 999
Q gi|254780197|r 245 KIV 247 (264)
Q Consensus 245 ~Ii 247 (264)
T Consensus 241 ~Ii 243 (243)
T pfam00121 241 AII 243 (243)
T ss_pred HHC
T ss_conf 549