HHsearch results for GI: 254780197 and protein with PDBid: 1ka9_F
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=91.75 E-value=0.72 Score=24.82 Aligned_cols=137 Identities=8% Similarity=-0.070 Sum_probs=64.2
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHH--CCCCCCCCCCCHHHHHHCCCC
Q ss_conf 067775407310010420002213579999999999998334747998165520333--498000111002221000000
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYR--SGRTFEVLQKQLDCSLPSEFK 159 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~--~~~~~~~l~~Ql~~~l~~~~~ 159 (264)
.+..+-+.|++.+++| |+ . -++.+.+.+-.+..-...+..-+-+......+. ...+.+...-.+...++....
T Consensus 89 ~~~~ll~~G~~kvii~-S~---~-~~~~~~~~~~~~~~g~~~iv~~id~~~~~~~~~v~~~~~~~~t~~~~~~~~~~~~~ 163 (252)
T 1ka9_F 89 DARKLLLSGADKVSVN-SA---A-VRRPELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp HHHHHHHHTCSEEEEC-HH---H-HHCTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEEC-CH---H-HCCHHHHHHHHHHCCCCCEEEEEEEEEECCCCEEEECCCEEECCCCHHHHHHHHHH
T ss_conf 8789987389899988-42---4-30789999999854654326899876406775899759877669779999999987
Q ss_pred --CCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCC-HHHHHHHHCCCCCCEEEECHH
Q ss_conf --13411320513530455764311245544679999996332241643088627789-878999966898968897434
Q gi|254780197|r 160 --SSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVD-VANAEDFSLIENIDGLLVGGA 236 (264)
Q Consensus 160 --~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~-~~N~~~l~~~~~iDG~LVG~A 236 (264)
... |=+--+=.-||+.=++.+.++++ ++ ..++|++++|.|+ .+...++.+ .++||++||.|
T Consensus 164 ~g~~e--iiltdi~~dGt~~G~d~~l~~~i----~~---------~~~~pii~sGGv~~~~dl~~l~~-~g~~gvivg~a 227 (252)
T 1ka9_F 164 LGAGE--ILLTSMDRDGTKEGYDLRLTRMV----AE---------AVGVPVIASGGAGRMEHFLEAFQ-AGAEAALAASV 227 (252)
T ss_dssp HTCCE--EEEEETTTTTTCSCCCHHHHHHH----HH---------HCSSCEEEESCCCSHHHHHHHHH-TTCSEEEESHH
T ss_pred CCCCE--EEEEEECCCCCCCCCCHHHHHHH----HH---------HCCCCEEEECCCCCHHHHHHHHH-CCCCEEEEEHH
T ss_conf 47988--99986234576667416799999----85---------16987999779899999999997-89979998528
Q ss_pred HCC
Q ss_conf 358
Q gi|254780197|r 237 SLQ 239 (264)
Q Consensus 237 Sl~ 239 (264)
-+.
T Consensus 228 l~~ 230 (252)
T 1ka9_F 228 FHF 230 (252)
T ss_dssp HHT
T ss_pred HHC
T ss_conf 776