HHsearch results for GI: 254780197 and protein with PDBid: 1m6j_A
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=100.00 E-value=0 Score=619.68 Aligned_cols=248 Identities=35% Similarity=0.562 Sum_probs=227.1
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCC--CCCCCCEEEEECCHHHHHHHHHHH----CCCCCCHHHHHCCCCCCCCC
Q ss_conf 885069986465689999999999995222--345771199968965599999973----25763102220122233343
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIR--RNSCCIDVAICPPATLIYESSRLC----KTSSVIIGAQDCHIAEYGPY 77 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~--~~~~~veivi~Pp~~~L~~~~~~~----~~s~I~igAQnv~~~~~GA~ 77 (264)
.+|+||+||||||++..+...|.+.+.... ....++++++||||+||..+++.+ .++++.+|||||++ +.|||
T Consensus 3 ~~K~iI~gNWKMN~~~~~~~~~~~~l~~~~~~~~~~~~~vvi~Pp~~~L~~~~~~~~~~~~~~~i~~gaQn~~~-~~GA~ 81 (261)
T 1m6j_A 3 AGKFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANGANILVSAENAWT-KSGAY 81 (261)
T ss_dssp CSCEEEEEECCBCCCHHHHHHHHHHHHHHCCHHHHTTEEEEEEECGGGHHHHHHHHHTSTTGGGEEEEESCCBS-SSBSC
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEEHHHCCC-CCCCC
T ss_conf 99808998334478999999999999975523136887399979845299999998775048854651121134-67664
Q ss_pred CCCCCHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCC
Q ss_conf 32120677754073100104200022135799999999999983347479981655203334980001110022210000
Q gi|254780197|r 78 TGDISANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSE 157 (264)
Q Consensus 78 TGeiSa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~ 157 (264)
|||||+.||+|+||+||||||||||++|+|||++|++|++.|+++||+||+||||++++|+.+++.+++.+|+...+...
T Consensus 82 TGeiSa~mLkd~G~~yvIIGHSERR~~f~Etd~~I~~Kv~~al~~~l~pIlCIGE~leere~~~~~~~~~~Ql~~~~~~~ 161 (261)
T 1m6j_A 82 TGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVAIDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAI 161 (261)
T ss_dssp TTCCBHHHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCCHHHHHHCCCCEEEECCHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHHHHHHHHHHHHHCCC
T ss_conf 35266999997198679852512101158984999999999998799489993651888872880779999999886358
Q ss_pred --CCCCCCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEEC
Q ss_conf --001341132051353045576431124554467999999633224-16430886277898789999668989688974
Q gi|254780197|r 158 --FKSSVPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVG 234 (264)
Q Consensus 158 --~~~~~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG 234 (264)
...+++|||||||||||||++|+|++++++|++||+++.+.++.. +.++|||||||||++|+++|+++++|||+|||
T Consensus 162 ~~~~~~~iiIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVG 241 (261)
T 1m6j_A 162 SKEAWKNIILAYEPVWAIGTGKTATPDQAQEVHQYIRKWMTENISKEVAEATRIQYGGSVNPANCNELAKKADIDGFLVG 241 (261)
T ss_dssp CTGGGGGEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHSCEEECSCCCTTTHHHHHTSTTCCEEEES
T ss_pred CHHHHHCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEEE
T ss_conf 86665243677464763068988998999999999999998750333416773885388798699999578898858830
Q ss_pred HHHCCHHHHHHHHHHHHH
Q ss_conf 343588999999999999
Q gi|254780197|r 235 GASLQHELFLKIVEIVER 252 (264)
Q Consensus 235 ~ASl~~~~F~~Ii~~~~~ 252 (264)
|||||+++|.+|++.+.+
T Consensus 242 gASl~~~~F~~Ii~~~~~ 259 (261)
T 1m6j_A 242 GASLDAAKFKTIINSVSE 259 (261)
T ss_dssp GGGGSHHHHHHHHGGGGG
T ss_pred HHHCCHHHHHHHHHHHHH
T ss_conf 575687899999999983