HHsearch results for GI: 254780197 and protein with PDBid: 1r2r_A

>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00  E-value=0  Score=618.36  Aligned_cols=246  Identities=35%  Similarity=0.568  Sum_probs=230.0

Q ss_pred             CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf             98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r    2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI   81 (264)
Q Consensus         2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei   81 (264)
                      +.+|||+|+||||||++..+...|.+.+.... .+.++++++|||++||..+... .+++|.+||||||+.+.|||||||
T Consensus         1 ~~~rK~~I~~NWKmn~~~~~~~~~~~~l~~~~-~~~~~~v~i~Pp~~~l~~~~~~-~~~~i~igaQn~~~~~~GA~TGei   78 (248)
T 1r2r_A            1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAK-VPADTEVVCAPPTAYIDFARQK-LDPKIAVAAQNCYKVTNGAFTGEI   78 (248)
T ss_dssp             --CCCEEEEEECCBCCCHHHHHHHHHHHHHSC-CCTTEEEEEECCGGGHHHHHHH-SCTTSEEEESCCCSSSSBSCTTCC
T ss_pred             CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEEEECCHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCC
T ss_conf             99998789884354789999999999987146-7899889997988999999986-489966987622121587663646


Q ss_pred             CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf             06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r   82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS  161 (264)
Q Consensus        82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~  161 (264)
                      |+.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.++|.+++.+|+..++.++...+
T Consensus        79 S~~mL~d~G~~~viiGHSERR~~~~Etd~~i~~K~~~al~~gl~pIlCIGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~  158 (248)
T 1r2r_A           79 SPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWS  158 (248)
T ss_dssp             CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGG
T ss_pred             CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf             89999986998899653887755399839999999999977975999955407655056589999999998860365323


Q ss_pred             CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf             41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r  162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH  240 (264)
Q Consensus       162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~  240 (264)
                      +++|||||+||||||++|+|++++++|.+||+.+.+.++.. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus       159 ~iiIAYEPvWAIGtG~~a~~~~i~~~~~~ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~iDG~LVG~ASl~~  238 (248)
T 1r2r_A          159 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKP  238 (248)
T ss_dssp             GEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred             EEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf             38999645750467998986999999999999999861386658650997478686289999567898979810786786


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780197|r  241 ELFLKIVEIV  250 (264)
Q Consensus       241 ~~F~~Ii~~~  250 (264)
                      | |++|+++.
T Consensus       239 e-F~~Ii~~~  247 (248)
T 1r2r_A          239 E-FVDIINAK  247 (248)
T ss_dssp             H-HHHHHTSC
T ss_pred             H-HHHHHHHC
T ss_conf             8-99999745