HHsearch results for GI: 254780197 and protein with PDBid: 1r2r_A
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=100.00 E-value=0 Score=618.36 Aligned_cols=246 Identities=35% Similarity=0.568 Sum_probs=230.0
Q ss_pred CCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCC
Q ss_conf 98885069986465689999999999995222345771199968965599999973257631022201222333433212
Q gi|254780197|r 2 KVGIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDI 81 (264)
Q Consensus 2 ~~~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGei 81 (264)
+.+|||+|+||||||++..+...|.+.+.... .+.++++++|||++||..+... .+++|.+||||||+.+.|||||||
T Consensus 1 ~~~rK~~I~~NWKmn~~~~~~~~~~~~l~~~~-~~~~~~v~i~Pp~~~l~~~~~~-~~~~i~igaQn~~~~~~GA~TGei 78 (248)
T 1r2r_A 1 APSRKFFVGGNWKMNGRKKNLGELITTLNAAK-VPADTEVVCAPPTAYIDFARQK-LDPKIAVAAQNCYKVTNGAFTGEI 78 (248)
T ss_dssp --CCCEEEEEECCBCCCHHHHHHHHHHHHHSC-CCTTEEEEEECCGGGHHHHHHH-SCTTSEEEESCCCSSSSBSCTTCC
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHCC-CCCCCEEEEECCHHHHHHHHHH-HCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99998789884354789999999999987146-7899889997988999999986-489966987622121587663646
Q ss_pred CHHHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCCCCC
Q ss_conf 06777540731001042000221357999999999999833474799816552033349800011100222100000013
Q gi|254780197|r 82 SANMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEFKSS 161 (264)
Q Consensus 82 Sa~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 161 (264)
|+.||+|+||+||||||||||++|+|||++|++|+++|+++||+||+||||++++|+.++|.+++.+|+..++.++...+
T Consensus 79 S~~mL~d~G~~~viiGHSERR~~~~Etd~~i~~K~~~al~~gl~pIlCIGE~~~e~~~~~~~~~l~~Ql~~~l~~~~~~~ 158 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVIACIGEKLDEREAGITEKVVFEQTKVIADNVKDWS 158 (248)
T ss_dssp CHHHHHHTTCCEEEESCHHHHHTSCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCSCGG
T ss_pred CHHHHHHCCCCEEEECCHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 89999986998899653887755399839999999999977975999955407655056589999999998860365323
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
+++|||||+||||||++|+|++++++|.+||+.+.+.++.. ++++||||||||+++|+++|+++++|||+||||||||+
T Consensus 159 ~iiIAYEPvWAIGtG~~a~~~~i~~~~~~ir~~l~~~~~~~~~~~i~iLYGGSV~~~N~~~i~~~~~iDG~LVG~ASl~~ 238 (248)
T 1r2r_A 159 KVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKSNVSDAVAQSTRIIYGGSVTGATCKELASQPDVDGFLVGGASLKP 238 (248)
T ss_dssp GEEEEECCGGGSSSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEECSCCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred EEEEEECCEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEECCCCCHHHHHHHHCCCCCCEEEEEHHHCCH
T ss_conf 38999645750467998986999999999999999861386658650997478686289999567898979810786786
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
| |++|+++.
T Consensus 239 e-F~~Ii~~~ 247 (248)
T 1r2r_A 239 E-FVDIINAK 247 (248)
T ss_dssp H-HHHHHTSC
T ss_pred H-HHHHHHHC
T ss_conf 8-99999745