HHsearch results for GI: 254780197 and protein with PDBid: 1viz_A
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=90.39 E-value=0.31 Score=27.09 Aligned_cols=45 Identities=29% Similarity=0.538 Sum_probs=32.0
Q ss_pred CCCEEEECCCC-CHHHHHHHHCCCCCCEEEECHHHC-CHHHHHHHHHHH
Q ss_conf 64308862778-987899996689896889743435-889999999999
Q gi|254780197|r 204 QKMRILYGGSV-DVANAEDFSLIENIDGLLVGGASL-QHELFLKIVEIV 250 (264)
Q Consensus 204 ~~i~ilYGGSV-~~~N~~~l~~~~~iDG~LVG~ASl-~~~~F~~Ii~~~ 250 (264)
.++|+.+|+.+ +++-++++.+ ..||+-||+|=- +++++.++++.+
T Consensus 181 t~~Pv~vGFGIst~eqa~~i~~--~ADGVVVGSAive~i~~~~~~v~~i 227 (240)
T 1viz_A 181 ETSTLFYGGGIKDAETAKQYAE--HADVIVVGNAVYEDFDRALKTVAAV 227 (240)
T ss_dssp SSSEEEEESSCCSHHHHHHHHT--TCSEEEECTHHHHCHHHHHTHHHHH
T ss_pred CCCCEEEECCCCCHHHHHHHHC--CCCEEEECHHHHHHHHHHHHHHHHH
T ss_conf 6887799858599999999980--6999998968871499999999999