HHsearch results for GI: 254780197 and protein with PDBid: 2j27_A
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 1ml1_A 2wsr_A 2v2h_A 2v2d_A 1dkw_A 2vei_A 2vek_A* 2vel_A ...
Probab=100.00 E-value=0 Score=625.69 Aligned_cols=244 Identities=32% Similarity=0.542 Sum_probs=228.9
Q ss_pred CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf 88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r 4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA 83 (264)
Q Consensus 4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa 83 (264)
.|||||+||||||++..+...|.+.+..... ..++++++|||++||..+.+.++++++.+|||||++ +.||||||||+
T Consensus 3 ~~k~iI~aNWKmn~~~~~~~~~~~~~~~~~~-~~~~~vvi~Pp~~~L~~~~~~~~~~~i~~gaQn~~~-~~GA~TGeISa 80 (250)
T 2j27_A 3 KPQPIAAANWKCNGSQQSLSELIDLFNSTSI-NHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIA-KSGAFTGEVSL 80 (250)
T ss_dssp CCCCEEEEECCBCCCHHHHHHHHHHHHTCCC-CSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCBS-SCBSCTTCCBH
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHCCCCCEECCCCCCC-CCCCCCCCCCH
T ss_conf 9983899971117799999999999870578-999089968988889999987448705561401668-89987341359
Q ss_pred HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf 777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r 84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS 161 (264)
Q Consensus 84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~ 161 (264)
.||+|+||+||||||||||.+|+|||++|++|+.+|+++||+||+||||++++|+.+++.+++.+||...+.++. ..+
T Consensus 81 ~mLkd~G~~yvIIGHSERR~~f~Etd~~V~~K~~~al~~~l~pI~CIGE~~~~r~~~~~~~~l~~Ql~~~l~~~~~~~~~ 160 (250)
T 2j27_A 81 PILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWA 160 (250)
T ss_dssp HHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGGG
T ss_pred HHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf 99998187804544687774269972999899999998699379994640776661760567999999997006354430
Q ss_pred CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf 41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r 162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH 240 (264)
Q Consensus 162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~ 240 (264)
++||||||+||||||++|+|++|+++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus 161 ~iiIAYEPvWAIGtG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVGgASl~~ 240 (250)
T 2j27_A 161 KVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKP 240 (250)
T ss_dssp GEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred CEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf 44899776544278988981879999999999999971742417874895689898799999678999968843364687
Q ss_pred HHHHHHHHHH
Q ss_conf 9999999999
Q gi|254780197|r 241 ELFLKIVEIV 250 (264)
Q Consensus 241 ~~F~~Ii~~~ 250 (264)
+ |++||+..
T Consensus 241 e-F~~Ii~~~ 249 (250)
T 2j27_A 241 E-FVDIIKAT 249 (250)
T ss_dssp T-HHHHHHTT
T ss_pred H-HHHHHHHC
T ss_conf 9-99999854