HHsearch results for GI: 254780197 and protein with PDBid: 2j27_A

>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 1ml1_A 2wsr_A 2v2h_A 2v2d_A 1dkw_A 2vei_A 2vek_A* 2vel_A ...
Probab=100.00  E-value=0  Score=625.69  Aligned_cols=244  Identities=32%  Similarity=0.542  Sum_probs=228.9

Q ss_pred             CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCH
Q ss_conf             88506998646568999999999999522234577119996896559999997325763102220122233343321206
Q gi|254780197|r    4 GIRPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISA   83 (264)
Q Consensus         4 ~mK~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa   83 (264)
                      .|||||+||||||++..+...|.+.+..... ..++++++|||++||..+.+.++++++.+|||||++ +.||||||||+
T Consensus         3 ~~k~iI~aNWKmn~~~~~~~~~~~~~~~~~~-~~~~~vvi~Pp~~~L~~~~~~~~~~~i~~gaQn~~~-~~GA~TGeISa   80 (250)
T 2j27_A            3 KPQPIAAANWKCNGSQQSLSELIDLFNSTSI-NHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIA-KSGAFTGEVSL   80 (250)
T ss_dssp             CCCCEEEEECCBCCCHHHHHHHHHHHHTCCC-CSCCEEEEECCGGGHHHHHHHCCCTTEEEEESCCBS-SCBSCTTCCBH
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHHCCC-CCCEEEEECCCHHHHHHHHHHHCCCCCEECCCCCCC-CCCCCCCCCCH
T ss_conf             9983899971117799999999999870578-999089968988889999987448705561401668-89987341359


Q ss_pred             HHHHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC--CCC
Q ss_conf             777540731001042000221357999999999999833474799816552033349800011100222100000--013
Q gi|254780197|r   84 NMLADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF--KSS  161 (264)
Q Consensus        84 ~mL~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~--~~~  161 (264)
                      .||+|+||+||||||||||.+|+|||++|++|+.+|+++||+||+||||++++|+.+++.+++.+||...+.++.  ..+
T Consensus        81 ~mLkd~G~~yvIIGHSERR~~f~Etd~~V~~K~~~al~~~l~pI~CIGE~~~~r~~~~~~~~l~~Ql~~~l~~~~~~~~~  160 (250)
T 2j27_A           81 PILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWA  160 (250)
T ss_dssp             HHHHHTTCCEEEESCHHHHHHSCCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHTCCGGGGG
T ss_pred             HHHHHHCCCCEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCHHHHH
T ss_conf             99998187804544687774269972999899999998699379994640776661760567999999997006354430


Q ss_pred             CCEEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHH-HCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
Q ss_conf             41132051353045576431124554467999999633224-16430886277898789999668989688974343588
Q gi|254780197|r  162 VPVIAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEE-GQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQH  240 (264)
Q Consensus       162 ~~iIAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~-~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~  240 (264)
                      ++||||||+||||||++|+|++|+++|.+||+++.++|+.. ++++|||||||||++|+++|+++++|||+||||||||+
T Consensus       161 ~iiIAYEPvWAIGtG~~as~~~i~~~~~~Ir~~l~~~~~~~~~~~i~ilYGGSV~~~N~~~i~~~~~vDG~LVGgASl~~  240 (250)
T 2j27_A          161 KVVIAYEAVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKP  240 (250)
T ss_dssp             GEEEEEECGGGTTSSCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHCCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGST
T ss_pred             CEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHCCCCCEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCH
T ss_conf             44899776544278988981879999999999999971742417874895689898799999678999968843364687


Q ss_pred             HHHHHHHHHH
Q ss_conf             9999999999
Q gi|254780197|r  241 ELFLKIVEIV  250 (264)
Q Consensus       241 ~~F~~Ii~~~  250 (264)
                      + |++||+..
T Consensus       241 e-F~~Ii~~~  249 (250)
T 2j27_A          241 E-FVDIIKAT  249 (250)
T ss_dssp             T-HHHHHHTT
T ss_pred             H-HHHHHHHC
T ss_conf             9-99999854