HHsearch results for GI: 254780197 and protein with PDBid: 2jgq_A

>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=100.00  E-value=0  Score=562.49  Aligned_cols=231  Identities=28%  Similarity=0.413  Sum_probs=201.5

Q ss_pred             CEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             50699864656899999999999952223457711999689655999999732576310222012223334332120677
Q gi|254780197|r    6 RPLVVGNWKMHGLRLSLERIQKIVEGIRRNSCCIDVAICPPATLIYESSRLCKTSSVIIGAQDCHIAEYGPYTGDISANM   85 (264)
Q Consensus         6 K~iIigNWKMN~~~~~~~~~~~~~~~~~~~~~~veivi~Pp~~~L~~~~~~~~~s~I~igAQnv~~~~~GA~TGeiSa~m   85 (264)
                      .|||+||||||++..+...|.+.+..........+|++||||++|...    ...++.+|||||++++.||||||||+.|
T Consensus         1 tKiiiaNWKmn~~~~~~~~~l~~l~~~l~~~~~~~v~i~P~~~~l~~~----~~~~~~igaQn~~~~~~GA~TGevS~~m   76 (233)
T 2jgq_A            1 TKIAMANFKSAMPIFKSHAYLKELEKTLKPQHFDRVFVFPDFFGLLPN----SFLHFTLGVQNAYPRDCGAFTGEITSKH   76 (233)
T ss_dssp             CCEEEEECTBCSCHHHHHHHHHHHHHHSCGGGTTTEEEECCTTTCCCS----CCSSSEECBSCCBSSSSBSCTTCCBHHH
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHC----CCCCCEEEEEECCCCCCCCCCCCCCHHH
T ss_conf             978999877588989999999999986485678889995982898754----4669669988798877888856238999


Q ss_pred             HHHHCCCCEEECCHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHCCCCCCCCCCCHHHHHHCCC-CCCCCE
Q ss_conf             7540731001042000221357999999999999833474799816552033349800011100222100000-013411
Q gi|254780197|r   86 LADCGANFVILGHSERRIGHREDSYVVQSKVKSACNAGLYPIVCIGETDEEYRSGRTFEVLQKQLDCSLPSEF-KSSVPV  164 (264)
Q Consensus        86 L~d~g~~~viiGHSERR~~~~E~d~~I~~K~~~al~~~l~pIlCiGE~~~e~~~~~~~~~l~~Ql~~~l~~~~-~~~~~i  164 (264)
                      |+|+||+||||||||||.+|+|+|++|++|+++|++++|+||+||||++++|+.+.+.  +..|+...+.++. ...++|
T Consensus        77 Lkd~g~~~viiGHSERR~~~~E~d~~v~~K~~~a~~~~l~pI~CiGE~~~~~~~~~~~--~~~~l~~~l~~~~~~~~~ii  154 (233)
T 2jgq_A           77 LEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKNFKIVYCIGEELTTREKGFKA--VKEFLSEQLENIDLNYPNLV  154 (233)
T ss_dssp             HHHTTCCEEEECCHHHHHTTCCCHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHCHHH--HHHHHHHHHTTSCTTCTTEE
T ss_pred             HHHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCCHH--HHHHHHHHHHHCCCCCCCCC
T ss_conf             9971789799755888986599829999999999987996999837621223316305--99999999863100222222


Q ss_pred             EEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
Q ss_conf             32051353045576431124554467999999633224164308862778987899996689896889743435889999
Q gi|254780197|r  165 IAYEPIWAIGTGRVPAVVDLEKIHSFVRRILLDRFPEEGQKMRILYGGSVDVANAEDFSLIENIDGLLVGGASLQHELFL  244 (264)
Q Consensus       165 IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~l~~~~~~~~~~i~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~  244 (264)
                      |||||+||||||++|++++++++|.+||+.+.       +++||||||||+++|+++|+++++|||+||||||||+++|.
T Consensus       155 IAYEPvWAIGtG~~a~~~~i~~~~~~Ir~~~~-------~~~~ilYGGSV~~~N~~~l~~~~~iDG~LVG~ASl~~~~F~  227 (233)
T 2jgq_A          155 VAYEPIWAIGTKKSASLEDIYLTHGFLKQILN-------QKTPLLYGGSVNTQNAKEILGIDSVDGLLIGSASWELENFK  227 (233)
T ss_dssp             EEECCGGGTTC--CCCHHHHHHHHHHHHHHSC-------TTSCEEEESSCCTTTHHHHHTSTTCCEEEESGGGGSHHHHH
T ss_pred             CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHCCCCCCEEEECHHHCCHHHHH
T ss_conf             46686331478998987899999999999972-------68858870789875999985788999789665876989999


Q ss_pred             HHHHH
Q ss_conf             99999
Q gi|254780197|r  245 KIVEI  249 (264)
Q Consensus       245 ~Ii~~  249 (264)
                      +||++
T Consensus       228 ~Ii~~  232 (233)
T 2jgq_A          228 TIISF  232 (233)
T ss_dssp             HHHTT
T ss_pred             HHHHH
T ss_conf             99954