RPS-BLAST 2.2.22 [Sep-27-2009] Database: CddA 21,609 sequences; 6,263,737 total letters Searching..................................................done Query= gi|254780198|ref|YP_003064611.1| hypothetical protein CLIBASIA_00415 [Candidatus Liberibacter asiaticus str. psy62] (69 letters) >gnl|CDD|33492 COG3696, COG3696, Putative silver efflux pump [Inorganic ion transport and metabolism]. Length = 1027 Score = 24.0 bits (52), Expect = 8.9 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Query: 9 VDVFVIVATIITCFFMNKQCAWWLRVFLPF-LLISIMIVHITHISG 53 ++ V+V ++ F N + A + + LP LLI+ ++++ IS Sbjct: 341 IEGSVLVIIVLALFLGNFRSALIVIISLPLSLLIAFIVMNFFGISA 386 Database: CddA Posted date: Feb 4, 2011 9:38 PM Number of letters in database: 6,263,737 Number of sequences in database: 21,609 Lambda K H 0.344 0.150 0.535 Gapped Lambda K H 0.267 0.0747 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 21609 Number of Hits to DB: 961,265 Number of extensions: 44877 Number of successful extensions: 383 Number of sequences better than 10.0: 1 Number of HSP's gapped: 382 Number of HSP's successfully gapped: 39 Length of query: 69 Length of database: 6,263,737 Length adjustment: 40 Effective length of query: 29 Effective length of database: 5,399,377 Effective search space: 156581933 Effective search space used: 156581933 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 38 (21.6 bits) S2: 51 (23.4 bits)