RPS-BLAST 2.2.22 [Sep-27-2009]

Database: CddA 
           21,609 sequences; 6,263,737 total letters

Searching..................................................done

Query= gi|254780198|ref|YP_003064611.1| hypothetical protein
CLIBASIA_00415 [Candidatus Liberibacter asiaticus str. psy62]
         (69 letters)



>gnl|CDD|33492 COG3696, COG3696, Putative silver efflux pump [Inorganic ion
           transport and metabolism].
          Length = 1027

 Score = 24.0 bits (52), Expect = 8.9
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 9   VDVFVIVATIITCFFMNKQCAWWLRVFLPF-LLISIMIVHITHISG 53
           ++  V+V  ++  F  N + A  + + LP  LLI+ ++++   IS 
Sbjct: 341 IEGSVLVIIVLALFLGNFRSALIVIISLPLSLLIAFIVMNFFGISA 386


  Database: CddA
    Posted date:  Feb 4, 2011  9:38 PM
  Number of letters in database: 6,263,737
  Number of sequences in database:  21,609
  
Lambda     K      H
   0.344    0.150    0.535 

Gapped
Lambda     K      H
   0.267   0.0747    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21609
Number of Hits to DB: 961,265
Number of extensions: 44877
Number of successful extensions: 383
Number of sequences better than 10.0: 1
Number of HSP's gapped: 382
Number of HSP's successfully gapped: 39
Length of query: 69
Length of database: 6,263,737
Length adjustment: 40
Effective length of query: 29
Effective length of database: 5,399,377
Effective search space: 156581933
Effective search space used: 156581933
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 51 (23.4 bits)