HHsearch results for GI: 254780200 and protein with PDBid: 1qgo_A

>1qgo_A CBIK protein, anaerobic cobalamine biosynthetic cobalt chelatase; vitamin B12, metal ION chelation, cobalt precorrin; 2.40A {Salmonella typhimurium LT2} SCOP: c.92.1.2
Probab=99.79  E-value=1.2e-17  Score=141.88  Aligned_cols=197  Identities=13%  Similarity=0.125  Sum_probs=150.3

Q ss_pred             HCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf             104542478999998709965899631711100146899999999998717-9986421334557800689999999999
Q gi|254780200|r  119 RYGKPSVKEIINNLREEGCDRLLIFPLYPQYSAATTGTAQDKVFQELIHMR-WSPSLRTVPPYYEDSDYISALAQSIREH  197 (343)
Q Consensus       119 ry~~P~i~~~l~~l~~~g~~~ii~lPLyPqyS~sTtgS~~~~~~~~l~~~~-~~~~~~~I~~~~~~p~yI~a~~~~I~~~  197 (343)
                      ....|++++++.+|.++|+++++++|||     .+.|..++.+.+.+.+.+ ..+++.+.+++..+|.++.++++.+.+.
T Consensus        56 ~~~~p~~~~al~~l~~~G~~~i~V~Pl~-----l~~G~~~~di~~~~~~~~~~~~~i~~~~pll~~~~~~~~~~~~l~~~  130 (264)
T 1qgo_A           56 GIDIDTPLQALQKLAAQGYQDVAIQSLH-----IINGDEYEKIVREVQLLRPLFTRLTLGVPLLSSHNDYVQLMQALRQQ  130 (264)
T ss_dssp             CCCCCCHHHHHHHHHHTTCCEEEEEECC-----SBCSHHHHHHHHHHHHHGGGSSEEEECCCSBSSHHHHHHHHHHHHTT
T ss_pred             CCCCCCHHHHHHHHHHCCCCEEEEEEEE-----CCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf             7779999999999997799779998740-----34632599999999987753794698357799989999999999984


Q ss_pred             HHHCCCCCCEEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCC
Q ss_conf             97338998669998336750267627998889999999999972667567047862257776544302689999899769
Q gi|254780200|r  198 FESIQWTPEMLLVSFHQMPVSYLLKGDPYGCHCHKTARLLKEFLSWPDDRFKICFQSRFGRIKCLEPPTDKTVEKLAHDG  277 (343)
Q Consensus       198 l~~~~~~~~~llfSaHglP~~~~~~gDpY~~q~~~t~~~i~~~l~~~~~~~~l~fQSr~Gp~~WL~P~t~~~l~~L~~~G  277 (343)
                      +... ..++.|||++||-|..       +...+......+.+ .+   ..+.++|.+  |     +|++++++++|.+.|
T Consensus       131 ~~~~-~~~~~lllvgHGs~~~-------~~~~~~~~~~~l~~-~~---~~v~v~~~~--~-----~P~~~~~l~~l~~~g  191 (264)
T 1qgo_A          131 MPSL-RQTEKVVFMGHGASHH-------AFAAYACLDHMMTA-QR---FPARVGAVE--S-----YPEVDILIDSLRDEG  191 (264)
T ss_dssp             CCCC-CTTEEEEEEECCCSHH-------HHHHHHHHHHHHHH-HT---CSEEEEETT--S-----SSCHHHHHHHHHHHT
T ss_pred             CCCC-CCCCEEEEEECCCCCH-------HHHHHHHHHHHHHH-CC---CCEEEEEEE--E-----CCCHHHHHHHHHHCC
T ss_conf             4556-8885799995799734-------25899999999996-38---985999985--0-----698899999987457


Q ss_pred             CCCEEEECCHHHHCCHHHHHHHH----HHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHC
Q ss_conf             98399974405422125588875----8999999975997589816898798999999999999842
Q gi|254780200|r  278 IKSLAIITPGFSSDCLETSYEIA----HEAKEIFVNGGGEKFTQVPCLNSSNLSIDLLEKITRRELM  340 (343)
Q Consensus       278 ~k~v~v~p~gFvsD~lETl~Eid----ie~~e~~~e~Gg~~~~rvp~lN~~~~fi~~La~lv~~~l~  340 (343)
                      .++|+++| -|++++..+..|+-    ...++.+.+.|++...+.+.|+++|.+++.+.+-+++.|.
T Consensus       192 ~~~v~v~P-~fl~~G~h~~~Di~~~~~~s~~~~l~~~g~~~~~~~~~LG~~p~v~~~~~~r~~~al~  257 (264)
T 1qgo_A          192 VTGVHLMP-LMLVAGDHAINDMASDDGDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALN  257 (264)
T ss_dssp             CCEEEEEE-CSSSCCHHHHTTTTSSSTTSHHHHHHHTTCCEEECCCCGGGSHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEEE-CEECCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             98799997-8002573323201001147999988875984644135779997999999999999984