HHsearch alignment for GI: 254780201 and conserved domain: cd06435

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.
Probab=96.14  E-value=0.11  Score=30.20  Aligned_cols=188  Identities=15%  Similarity=0.145  Sum_probs=98.1

Q ss_pred             EEEECC--HHHHHHHHHHHHHCCCC-EEEEEECCC--CH--HHHHHHHHHC-CCCCEEE-EECCCCHHHHHHHHHHCCCC
Q ss_conf             999416--77899999999708998-149997176--52--8999999711-7873899-94566604799998622100
Q gi|254780201|r  154 VVHCYY--QDTWIEISHILLRLNFD-FDLFVTVVE--AN--KDFEQDVLKY-FPSAQLY-VMENKGRDVRPFLYLLELGV  224 (394)
Q Consensus       154 vlHlyY--~DLl~E~~~~L~~ip~~-~DL~ITt~~--~~--~~~~~~~~~~-~~~a~V~-vv~NRGRDI~PfL~~~~~~~  224 (394)
T Consensus         3 iIPayNE~~~vi~~~l~sl~~~~Yp~~eIiVvdd~stD~t~~~~v~~~~~~~~~~~~~~~~~~~~g~K~~alN~~l~~-~   81 (236)
T cd06435           3 HVPCYEEPPEMVKETLDSLAALDYPNFEVIVIDNNTKDEALWKPVEAHCAQLGERFRFFHVEPLPGAKAGALNYALER-T   81 (236)
T ss_pred             EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHH-C
T ss_conf             983589928999999999995799998799998929981589999999987299679999488899709999999996-4


Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCH
Q ss_conf             27867899973687767777644407899999987479989999999997609976898168765443323455432213
Q gi|254780201|r  225 FDRYDYLCKIHGKKSQREGYHPIEGIIWRRWLFFDLLGFSDIAIRIINTFEQNPCLGMIGSRRYRRYKRWSFFAKRSEVY  304 (394)
Q Consensus       225 l~~YD~v~klHtKKS~~~~~~~~~G~~Wr~~Ll~~LLGs~~~v~~Il~~F~~~p~lGlv~p~~~~~~~~~~~~~~~~~~~  304 (394)
T Consensus        82 ~~~~e~i~~~DaD~~---------------------~-~pd~L~~~v~~f~-~p~vg~v~~~~~~~~~~----~~~~~~~  134 (236)
T cd06435          82 APDAEIIAVIDADYQ---------------------V-EPDWLKRLVPIFD-DPRVGFVQAPQDYRDGE----ESLFKRM  134 (236)
T ss_pred             CCCCEEEEEECCCCC---------------------C-CHHHHHHHHHHHC-CCCEEEEECCEECCCCC----CCHHHHH
T ss_conf             798549999768877---------------------7-8689999998604-98768995561314877----6799999


Q ss_pred             HHHH-HHHHHCCCCC-CCCCCCCCCEEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             8999-9999748998-8554773770123320988875765882235854468888738999999999999986980335
Q gi|254780201|r  305 RRVI-DLAKRAGFPT-KRLHLDFFNGTMFWVKPKCLEPLRNLHLIGEFEEERNLKDGALEHAVERFFACSVRYTEFSIES  382 (394)
Q Consensus       305 ~~~~-~L~~rlgi~~-~~~~~~FpaGSMFW~R~~AL~pL~~l~l~~DF~~E~g~~DGTlaHAIERl~~~iv~~~gf~i~~  382 (394)
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~~l~~iGg------f~~~~~~ED~--------dl~~rl~~~G~~~~y  200 (236)
T cd06435         135 CYAEYKGFFDIGMVSRNERNAIIQHGTMCLIRRSALDDVGG------WDEWCITEDS--------ELGLRMHEAGYIGVY  200 (236)
T ss_pred             HHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEHHHHHHHCC------CCCCCCCCHH--------HHHHHHHHCCCEEEE
T ss_conf             99999999998898885389747666468878899998389------8877757779--------999999985997997


Q ss_pred             E
Q ss_conf             2
Q gi|254780201|r  383 V  383 (394)
Q Consensus       383 v  383 (394)
T Consensus       201 ~  201 (236)
T cd06435         201 V  201 (236)
T ss_pred             C
T ss_conf             2