HHsearch alignment for GI: 254780202 and conserved domain: TIGR00238
>TIGR00238 TIGR00238 lysine 2,3-aminomutase YodO family protein; InterPro: IPR003739 This family represents essentially the whole of the Escherichia coli YjeK family and of some of its apparent orthologs. YodO in Bacillus subtilis, a family member which is a longer protein by an additional 100 residues, is characterised as a lysine 2,3-aminomutase with iron, sulphide and pyridoxal 5'-phosphate groups . The homologue, MJ0634 from M. jannaschii, is preceded by nearly 200 C-terminal residues. This family shows similarity to molybdenum cofactor biosynthesis protein MoaA and related proteins..
Probab=90.65 E-value=0.41 Score=28.36 Aligned_cols=93 Identities=23% Similarity=0.375 Sum_probs=54.0
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCC-CCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 10558401373159997689888755533332368888775752----32588866-07899999999987521667873
Q gi|254780202|r 12 TLQGEGGHAGRVAVFCRFSGCNLWSGREQDRLSAQCRFCDTDFV----GIQGTKGG-RYNVDQLADLIEEQWITGEKEGR 86 (211)
Q Consensus 12 SiQGEG~~~G~p~vFiRl~GCnL~c~~~~~~~~~~C~~CDT~y~----~~~~~~~~-~~~~~~i~~~i~~~~~~~~~~~~ 86 (211)
T Consensus 121 ~~p~~~~~y~~~~~~~~~~~c~~-----------~c~yc~~~w~~~~~~~~~~~g~p~~~~~~~~~~~~~~-----~~~~ 184 (357)
T TIGR00238 121 PVPGLTHRYPNRALFLPKGGCAV-----------NCRYCFRNWLVRHFPYKEGPGNPKKKWEAALDYIAEH-----PELE 184 (357)
T ss_pred CCCHHHHHHHCEEEEEECCCCCH-----------HHHHHHHCCHHCCCCCCCCCCCCHHHHHHHHHHHHHC-----CCHH
T ss_conf 21024442100134664166402-----------2333332001100451003677367899999987404-----1023
Q ss_pred EEEEECCCCCCCC---CCHHHHHHHHCCCE--EEEECCC
Q ss_conf 8998077200003---51789999868987--9997278
Q gi|254780202|r 87 YCVLTGGEPLLQV---DVPLIQALNKRGFE--IAVETNG 120 (211)
Q Consensus 87 ~VviTGGEPllq~---l~~L~~~l~~~g~~--v~IETnG 120 (211)
T Consensus 185 ~~~~~ggdp~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (357)
T TIGR00238 185 EVLFSGGDPLLLKDHELEWLLKELESIPHLEGLRIGTRL 223 (357)
T ss_pred HHEEECCCCCCCCHHHHHHHHHHHHHCCCHHEEEECCCC
T ss_conf 320107876310057899999987533401002202322