HHsearch alignment for GI: 254780202 and conserved domain: TIGR02109
>TIGR02109 PQQ_syn_pqqE coenzyme PQQ biosynthesis protein E; InterPro: IPR011843 This entry describes coenzyme PQQ biosynthesis protein E, a gene required for the biosynthesis of pyrrolo-quinoline-quinone (coenzyme PQQ). PQQ is required for some glucose dehydrogenases and alcohol dehydrogenases.; GO: 0051539 4 iron 4 sulfur cluster binding, 0018189 pyrroloquinoline quinone biosynthetic process.
Probab=98.36 E-value=3.5e-07 Score=69.54 Aligned_cols=90 Identities=22% Similarity=0.367 Sum_probs=69.4
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC-CCCCHHHHHHH
Q ss_conf 89888755533332368888775752325888660789999999998752166787389980772000-03517899998
Q gi|254780202|r 30 SGCNLWSGREQDRLSAQCRFCDTDFVGIQGTKGGRYNVDQLADLIEEQWITGEKEGRYCVLTGGEPLL-QVDVPLIQALN 108 (211)
Q Consensus 30 ~GCnL~c~~~~~~~~~~C~~CDT~y~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~VviTGGEPll-q~l~~L~~~l~ 108 (211)
T Consensus 15 hRCPL-----------~CPYCSNPLel~--R~~~EL~T~~W~~Vl~qAa~lGvl---qlHfSGGEP~aR~DL~eLv~~A~ 78 (363)
T TIGR02109 15 HRCPL-----------QCPYCSNPLELA--RRKAELTTEEWTDVLTQAAELGVL---QLHFSGGEPLARPDLVELVAHAR 78 (363)
T ss_pred HCCCC-----------CCCCCCCCHHHH--HHHCCCCHHHHHHHHHHHHHCCCE---EEECCCCCCCCCCCHHHHHHHHH
T ss_conf 25888-----------777989706888--511468888999999999853906---75130776663357799999997
Q ss_pred HCCCEEEEECCCCCC--------CCCCCEEEEECC
Q ss_conf 689879997278886--------678850798416
Q gi|254780202|r 109 KRGFEIAVETNGTIE--------PPQGIDWICVSP 135 (211)
Q Consensus 109 ~~g~~v~IETnGt~~--------~~~~~d~it~SP 135 (211)
T Consensus 79 ~LGlYtNLITSGvGLt~~rl~~L~~aGLDHvQlSf 113 (363)
T TIGR02109 79 RLGLYTNLITSGVGLTEARLDALADAGLDHVQLSF 113 (363)
T ss_pred HCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 75870146776345679999999757985788764